Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2527 |
Symbol | |
ID | 4483842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3218046 |
End bp | 3219125 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639723275 |
Product | cytochrome-c peroxidase |
Protein accession | YP_866433 |
Protein GI | 117925816 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1858] Cytochrome c peroxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.730316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0763035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCATC CATTTAACGC GATTTGGAGA ACTGCCGTGA AAAAGTCGAT TGCGCTCTTT GCTGTGCTGG CTCTGGCCCC GCTGTCGGGA GCTTGGGCTG GAGAGGATTT AATGGCTCAG GCTCGTGAAC AGTTCAAGCC CATTCCTTCG GCTCCCCCTG CTTTGATGGG TAATGCTGCA ACCAAGGAGC GGGTAGAGTT GGGGAAGATG CTGTTTTTTG ATCCCCGTAT CTCCGCCAGT CACTTAATTA GCTGCAACAC CTGTCATAAT GTGGGTATGG GTGGGGATGA TAATCTGGAG ACCTCCATCG GTCATGGTTG GGCCAAGGGA CCACGCAATG CCCCAACAGC ATTTAATGCG GTCTTCAATG TGGCGCAGTT TTGGGATGGT CGTGCTGAAG ATCTGAAAGC CCAAGCCAAG GGTCCGGTGC AGGCTGGGGT GGAGATGAAC AATAAGCCTG CTCAGGTCGA GGCGACCTTG CGCAGCATGC CTGAATATGT GACCCGCTTT GAACGCGCGT TTCCCGGTGA AAAGGTTTCG TTGAGCTTTG ACAATATGGC CAAAGCGATC GAGGCGTTTG AGGCAACCTT GATTACCCCA TACTCCCGCT TTGACCAATT TCTTGAGGGT AATGCTACCA TCCTGAACAA GCAGGAAAAA GAGGGTCTGG CGCTGTTCAT GGATAAAGGC TGTGCCGCTT GCCACGGTGG GGTGAACCTG GGTGGGCAGG GTTACTATCC CTTTGGTGTG GTTGAAAAAC CCGGTGCAGA CATTTTGCCG GAAGGGGATA AAGGTCGTTT TGAAGTGACG AAAACGGCGG ATGACTCCTA TGTGTTCCGT GCGGCACCGC TGCGCAATAT TGAGTTGACA GCCCCCTATT TCCACTCGGG TAAAGTGTGG GATCTGGAGC AAGCGGTGGC GGTGATGGGG CAGAGCCAAT TGGGTGAAAA ACTGAGCGAT TCCCAAATCC AGGCGATTAC CGCTTTTCTC AAAACCTTGA CCGGTGAGCA ACCCAAGGTG GAGTACCCCG TGCTGCCCGT GAGCACCGCG ACCACACCTA AGCCGGTGGC AATGCAATAG
|
Protein sequence | MDHPFNAIWR TAVKKSIALF AVLALAPLSG AWAGEDLMAQ AREQFKPIPS APPALMGNAA TKERVELGKM LFFDPRISAS HLISCNTCHN VGMGGDDNLE TSIGHGWAKG PRNAPTAFNA VFNVAQFWDG RAEDLKAQAK GPVQAGVEMN NKPAQVEATL RSMPEYVTRF ERAFPGEKVS LSFDNMAKAI EAFEATLITP YSRFDQFLEG NATILNKQEK EGLALFMDKG CAACHGGVNL GGQGYYPFGV VEKPGADILP EGDKGRFEVT KTADDSYVFR AAPLRNIELT APYFHSGKVW DLEQAVAVMG QSQLGEKLSD SQIQAITAFL KTLTGEQPKV EYPVLPVSTA TTPKPVAMQ
|
| |