| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2506 |
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| Symbol | |
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| ID | 4482481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3192774 |
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| End bp | 3193904 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639723254 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_866412 |
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| Protein GI | 117925795 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.139744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTAA CAGAGAGCGA TTTTCTGGAT TTGGAACAGC GACTGGGGGT TTCCCGTCGG
GCCTTTTTAA AGTTTTGCGC GGGTGTCGCC GCCTCCATGG GACTCGGTGG AAATGCGGGT
TTGGCCATGG CCGAGGCGGT GGTCACGGCC AAAAAGCGGC CCCCGGTGAT CTGGCTGCAT
GGCCAAGAGT GTACCGGTCC TTCAGAGACG CTGCTGCGTT CGGAGCAGCC CAGTCTGGAA
ACCCTGATTT TAGATCTAAT CTCCCTGGAG TATCACCAAA CCCTGGATGC CGGGGCGGGT
CATGGTGTGG AAGCGCGTAA ACGGCAATCC ATGGAGGAAA ATAAGGGCAA GTATGTGTTG
GTTATTGAGG GCTCCATTCC CCTGGCCGAT GGCGGTATTT ATTGCAAAAT CGGCGGTCAA
ACCATGCTGG AGGCCACCAA AGAGGCTGCC GAGCATGCGG CGGCTATCAT CGCTTTTGGT
TCCTGTGCCA GTTGGGGTGG GGTGCCCTCA TCGGGCATCA ACCCCACCGG TGCGGTGGGG
GCCCCGGCGG TGATTACCGA TAAGCCAGTG GTGACCATTC CGGGCTGTCC CCCTAACCCA
GCCAACTTTT TGGGTACGGT GCTCTATTTT GTCACCTACG GTAAGTTGCC CCCGCTGGAT
GCTCAAGGCC GCCCCAAATG GGCCTATGGC CGCCTGATTC ATGAAAACTG TTACCGTCGT
CCCCACTTTG ATGCTGGTCG TTTTGCCACC CAGTTTGGCG ATGAGGGGCA TAAACAGGGG
TGGTGCCTCT ATAAGTTGGG CTGCAAAGGG CCAGAGACCT ACAATAACTG CCCCAGCCTG
GAGTTCAACA ATGTGGGGGG TGGTGTGTGG CCGGTTGGGG TGGGGCATCC CTGCTTTGGT
TGTTCCGAGG GTGGGGTGGG CTTTACCAAA CCGCTCTTCT CGCTGGCCGA TGTAAAAACC
CATACCGCGC CCAACACCTT CCCAGCCATT GATTCGCGGG AAAACACCAA CGCGGCAAGC
GCGCTATCTG CCGGTTTGGC GGGGGTGGGC ATCGGTGTGG CCATTGGCGC GGGTGCGATG
GCGGCCAAAA AATTGGGCCA GCAAGAGCAT CTCTCCGATG ACCAGGGTTA A
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| Protein sequence | MAVTESDFLD LEQRLGVSRR AFLKFCAGVA ASMGLGGNAG LAMAEAVVTA KKRPPVIWLH
GQECTGPSET LLRSEQPSLE TLILDLISLE YHQTLDAGAG HGVEARKRQS MEENKGKYVL
VIEGSIPLAD GGIYCKIGGQ TMLEATKEAA EHAAAIIAFG SCASWGGVPS SGINPTGAVG
APAVITDKPV VTIPGCPPNP ANFLGTVLYF VTYGKLPPLD AQGRPKWAYG RLIHENCYRR
PHFDAGRFAT QFGDEGHKQG WCLYKLGCKG PETYNNCPSL EFNNVGGGVW PVGVGHPCFG
CSEGGVGFTK PLFSLADVKT HTAPNTFPAI DSRENTNAAS ALSAGLAGVG IGVAIGAGAM
AAKKLGQQEH LSDDQG
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