| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2496 |
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| Symbol | |
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| ID | 4484166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3183579 |
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| End bp | 3185066 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639723244 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_866402 |
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| Protein GI | 117925785 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0534594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.148721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAAC AGCGACCGAC CATTCTGGTG GTGGATGATG AGCTGCGTTC TCTGGAGTCG
CTGGCGCGTA TTCTGGAAGA AGAATTTGAT GTTAAAACCG CCCAAACCGT TGCTCAAGCC
GACGCCATTT TGCAGACCGA GTGGGTGCAG GTGGTGCTGT GTGATCAACG CATGCCGGAG
ATCACGGGGG TGGCCTATCT CAAAAAATTG AGGGACCTCT ATCCCGACGT CATTCGTATG
ATTATATCCG GTTATAGTGA TCCAGAGGAT ATCATCCACG CCGTTAACGA AGCGGGGATC
TATCACTATA TTTCCAAGCC GTGGCATCCC GACTCACTGC TGCTTACGTT GAGCAATGCC
ACCCGTCTGT ATGCCCTGCA ACGGCAAAAC CAAGCGTTGT CGGTAGAGGT CAAAATGACC
CCGCAGCGGT TGGATGAGAG CATGCGCCGT AAACGGGAAG GGTTGCGCCA GCGGTTTGCC
CGCAATGATG GCATTGTGCG CAGCCGGGGC AGTTGTATGG ATGCAGTGTG TCAGCGGCTA
AAAAAGGTTT CACCTTATGA TGTTTCGGTC TTATTGACCG GCGATTCTGG TACCGGTAAG
GAGCTGGCGG CCAAGGCGTT GCACTACAGC AGTTTGCGCT GGGATAAGGC GTTTGTGGTG
GAAAACTGTG GGGCGTTGCC GGATCAGTTG TTGGAAAGCG AGCTGTTTGG CTACAAAAAG
GGGGCCTTTA CTGGGGCGGT GGAGGATCGT ATAGGGCTCT TTGAGCGGGC CGACGGGGGT
ACTTTGTTTT TGGATGAGAT TGGGGAGATC TCACCGGCCT TTCAGGTTAA GTTGTTGCGG
GTGTTGCAGG AGGGGGAGAT TCGTCCCCTG GGCAGCAGCC GCACCCGCAA GGTGGATGTG
CGGTTGATTG CGGCCACCAA TCGGGATCTT GAGACAGAGA TGCTGGCGGG GCGTTTTCGG
CCTGATCTCT ACTATCGGTT GGCGGCGGTG ACCATCTATC TGCCCGCTTT AAAGGCGCGT
CCCGAGGATA TTCCGGCCTT GGCCCATGCG TTGTTGGAGC AGGCGATGGA GAGCATGGGC
AAACAGGTGC GGGGCTTTAC TGAGGAGTGC ATGCACTGTT TACAGGCTTA CCCCTGGCCC
GGCAATGTGC GGGAGTTGCA AAATGAGATC CAGCATATGC TGGTGATGGC GGAGGGGGAT
CTGCTGGGGG CGGATCTGCT CTCTGCGCGG GTGTTGCAGG GGCTGCCGTG GCAGGAGCAG
GCGCAAGGGG AGGAGAGATG GCCGTTGTTA GGGCCGTTAG GGGGCAGTTT AAAAGAGCGG
GTCGAGCTGT TGGAGGCGCG TATTGTGCGG GAGACGCTGA TCCGGCACCG TTGGAATAAG
AGCCGGGCGG CCAAAGAGTT GGGGCTCTCC CGGGTGGGCT TGCGGAGTAA ACTGGAGCGC
TATGGTCTGG AGCAGCGCAG CAGCCAAGAT GCGCAAGCCC AAGCGTAG
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| Protein sequence | MVEQRPTILV VDDELRSLES LARILEEEFD VKTAQTVAQA DAILQTEWVQ VVLCDQRMPE
ITGVAYLKKL RDLYPDVIRM IISGYSDPED IIHAVNEAGI YHYISKPWHP DSLLLTLSNA
TRLYALQRQN QALSVEVKMT PQRLDESMRR KREGLRQRFA RNDGIVRSRG SCMDAVCQRL
KKVSPYDVSV LLTGDSGTGK ELAAKALHYS SLRWDKAFVV ENCGALPDQL LESELFGYKK
GAFTGAVEDR IGLFERADGG TLFLDEIGEI SPAFQVKLLR VLQEGEIRPL GSSRTRKVDV
RLIAATNRDL ETEMLAGRFR PDLYYRLAAV TIYLPALKAR PEDIPALAHA LLEQAMESMG
KQVRGFTEEC MHCLQAYPWP GNVRELQNEI QHMLVMAEGD LLGADLLSAR VLQGLPWQEQ
AQGEERWPLL GPLGGSLKER VELLEARIVR ETLIRHRWNK SRAAKELGLS RVGLRSKLER
YGLEQRSSQD AQAQA
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