Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2454 |
Symbol | |
ID | 4481901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3132557 |
End bp | 3135172 |
Gene Length | 2616 bp |
Protein Length | 871 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639723202 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_866360 |
Protein GI | 117925743 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2703] Hemerythrin |
TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.417102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGC TGCAAAAAGT ATCGGTCGCC CGTGGAATTT TTTGGGTCGA AGCGCCAGAT GCGGATCTGC GTATTTTGTG TGGCTGTCCG GCGGATAGTG TGAAGCATTT GATGAAGAGG GGGCTGATCC AGCAGCGGGA AAAGGGTGGT GTGCCCTGTG AGACAGGCCC TAATGCCATT TTGCTCTCCG ATGTGATGTT ACAAAACGGC GAGTTGAGCA ATCTGGGCGA ATTTCCGGTG CTGCAAATGC TCTACAAGCA GGGCATGATT CTACCCAACC ACCCCAACAA CAGCGGGCAG AAGCCGCTGT TAATTGGACG TTCGGAGCAG GTTAGCGCCC AGATGCAATA TATCTTTCGC GGGAACTACG GATTGGTTTC TGACGAAGAG TTGATGCAAG CGGGGGTCAG CTATGACGAT GCCCAGTGGA TGATGCGCCT AAAATTGCGT TTTGCCTTTG GCCGTATTGC GCCTTCAAAC CAATTGCTAG AAGGATTGGT GGTTGGGGAG GGTAAGGTTG AAATCCGCAA TGGCTTGTTT ATTGAGCGGT TGGCGACGAA CAATTACCGT TTTAGTTATC AAGATGAAAC GGTGGATGTG GATCTTAATT TAGAGATTGG CAACCGTTAC GAGACCCCTT ATCCCTTGGG TTATCTGCGG TTTAAGCGGG AATATTTTGC GGTCTTACAC AGCGGTGAAG GGGATGGTTG GGATGTTAAT CGTCCCAGCA TGTCTAGTAT TTTGATGTTT CAAGGTCGTC TCTATCTGAT TGATGCCGGG CCAAATCTCT ACAGCAATCT CTCTGCCCTG GGGGTGGTGG TGGATGAGAT CGAGGGCATT TTCCATACCC ATGCGCATGA TGATCATTTT TGTGGTATTA CCACCCTGAT GCGGGCAGGG CGGCGGCTTA AATATTTTGC TACTCCCGCC GTGCGGGCTA CGGTACAGCG CAAATTGGGT GCGCTGCTCT CTATGGAGCA TGAACGCTTT ACCGATTTTT TTGAGATCCA TGATCTGCAA CAGGGCTGTT GGAATAATTT GCAGGGTCTG GAGGTCAAAC CCATCTTTTC ACCCCACCCG CTGGAGACCA CCATTTTTCA ATTCCGCGCT TTATGGCATG AGGGTTACAA GGTGTATGCC CACTATGCGG ATATTGTCTC TTTAAAAGTG CTACACGGCA TGATCGAAGA GGATACCAGT AAGCCGGGTC TTTCTGAGGC ACTGTTTAAT AAGGTTAAGG TGAACTATTT AGCCCCGGTT GATCTGAAAA AGCTGGATAT CGGCGGGGGA ATGATTCATG GCAACGCAGA GGATTTTCGC GACGATCTTT CCGACAAAAT TTTACTCTCG CATACCGCAT TGGAGCTCAA TACGGCGCAA AAAGAGATCG GTTCCAGCGC CCCCTATGGG GTGGTGGATG TCTTGATTCA CAGCAAAAAC AACCGCACTC GCGAGTCGGC CTTGCAGTTC TTAGAGGCCT ATTTTCCAGA GATTCCTGGC GAGGATCACC AAGCGCTGCT CAACGGGGAT TTGGTGGAGT TTAATCCCGG TAATATTATG CTCAAAGAGG GGCAGCCGGC CAACTATATC CTGTTGGTGC TGCACGGCAC GGTGGAGCGT ATCAGTACCT TGCATGAGGT ACATGGGTAT ATGGATGCAG GCTCCTTTGT TGGGGAGTTA GCGGTGCTTA ACCGGTGCCC TTCAGAAGCC AGCTATCGTG CGGTAAACTT TGTTTGGACC CTTAGAATTC CGGTCTTTCT GTTTTTGGAG ATTATCCGCC GTCATGGTTT GTTGGAAAAA CTTCAGAGTA ATTTGGAAAT TCGCGCCTTT TTGCAATCTT CTCGACTTTT CGGTGAGGGG CTTTCGTACC CGGTTTTGAA CAGAATGTTA GAGGGCATTA CCAGCCGCCG CTACATGCCC GGTGAGCCGA TTCTTTGCCG GGATCTGACC TACCTGAATA TGATTTTGGC GGGCGAGGTG CGGCGTATGG TCGGTGGTGA AGAGCTGGAT GTGTTGGGTG CCCGGGACTT TTTTGGGGAG GAGGGGGCGG TCTTTGGTCT GCCCTGTTTG TTCCGGTTGG AGGTGCTGGA ACCCACCGAT GTGTTACAGA TCCCTGGGGA GCTGTTGCAG GCCATTCCGA TTGTGCGCTG GAAACTCTAT GAATCGTACC TACGTCGTGC GCAGGCGATT ATCCATGGTA GCGAAAATGA GCAAGTGTTT GTCTGGCGGG ATGCCTTTGC CATCGGTGTG CATGAAATGG ATACCCACCA TAAAAAATTG GTCGAGATTG CCAACAGTAT TATTGAGATT ATTGGTTCGA ATATAGGTAA AGAGTCGTTG ATGAAAAGCA TGGACGCTTT GATCGCGTAC ACGGAATATC ATTTTCAGGC TGAAGAGAAA ATGATGGAAG CTTATGGATA TGCAGATCTT GAGCACCATC ATCACCTGCA TGTTAAGTTG GTTTCTCAAG TGGTAGAGTT CCAAAATATG GTAGAGGAAA AGGACGACTA TTTGGGCTTA GATTTCGAGG GCTTTTTCAG TGATTGGTTA ATCCAACACA TTCTAAATGA AGATCGCCGT TATGCCATGC ACCTGAACGA CCGCTGTATT TTTTAA
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Protein sequence | MDKLQKVSVA RGIFWVEAPD ADLRILCGCP ADSVKHLMKR GLIQQREKGG VPCETGPNAI LLSDVMLQNG ELSNLGEFPV LQMLYKQGMI LPNHPNNSGQ KPLLIGRSEQ VSAQMQYIFR GNYGLVSDEE LMQAGVSYDD AQWMMRLKLR FAFGRIAPSN QLLEGLVVGE GKVEIRNGLF IERLATNNYR FSYQDETVDV DLNLEIGNRY ETPYPLGYLR FKREYFAVLH SGEGDGWDVN RPSMSSILMF QGRLYLIDAG PNLYSNLSAL GVVVDEIEGI FHTHAHDDHF CGITTLMRAG RRLKYFATPA VRATVQRKLG ALLSMEHERF TDFFEIHDLQ QGCWNNLQGL EVKPIFSPHP LETTIFQFRA LWHEGYKVYA HYADIVSLKV LHGMIEEDTS KPGLSEALFN KVKVNYLAPV DLKKLDIGGG MIHGNAEDFR DDLSDKILLS HTALELNTAQ KEIGSSAPYG VVDVLIHSKN NRTRESALQF LEAYFPEIPG EDHQALLNGD LVEFNPGNIM LKEGQPANYI LLVLHGTVER ISTLHEVHGY MDAGSFVGEL AVLNRCPSEA SYRAVNFVWT LRIPVFLFLE IIRRHGLLEK LQSNLEIRAF LQSSRLFGEG LSYPVLNRML EGITSRRYMP GEPILCRDLT YLNMILAGEV RRMVGGEELD VLGARDFFGE EGAVFGLPCL FRLEVLEPTD VLQIPGELLQ AIPIVRWKLY ESYLRRAQAI IHGSENEQVF VWRDAFAIGV HEMDTHHKKL VEIANSIIEI IGSNIGKESL MKSMDALIAY TEYHFQAEEK MMEAYGYADL EHHHHLHVKL VSQVVEFQNM VEEKDDYLGL DFEGFFSDWL IQHILNEDRR YAMHLNDRCI F
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