| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2444 |
|---|
| Symbol | |
|---|
| ID | 4482966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3115401 |
|---|
| End bp | 3116363 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639723192 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_866350 |
|---|
| Protein GI | 117925733 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.181475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTAA CAACAGTATC GGTAGTTATT CCCGTAAAAA ACGAAGCGGA CAAACTTGGG
GCATGTCTCC AGGCTATTTT GACACAAAGC CATGAGGTTT TGGAAATCAT TGTCATCGAC
TCGGGTTCAA CGGATGGCAC CCAAGATTTG GCGCAGCGTT TTGCTAAGGT CAAACTGGTG
CAGATTGAGC CTGCTCAATT TAATCATGGT GCGACCCGTA ACCAGGCCAT TGCCATGACC
CGTGGCGAAT TTGTGCTGTG TACAGTGGGG GATGCTCAAG CGGTTGATCG TTTTTGGATC
GAGCGGTTGC TCGCAGGGTT TACCGATGAT GCGGTGGTTG GTGTGTGTGG TCAGCAGGTG
GTTCCGCATC GAGCCGATAC CAACCCCGTG GAGTGGTTCC GTCCCCAATC CATAGCCACC
AGCCAACGGT ATCAGTTTGT CGACGCAGAC ACCTTTGCCG CAGCGCCGGT CGAACAACGC
AAAGCGGCCT GTAGTTGGGA TAATGTTACC GCCCTCTACC GGCGCCAAGC GATTATTGAG
ACCCCCTTTA CCACCTTTCC CTATGGCGAA GATCTTTTGT GGGCGCATGC ACAACTCAAC
ATGGGGCGGG CGTTGGTCTA TCAGCCTTCA GCTCAGGTTT ACCATTACCA CCTGATGAAC
CATCAAACCA CCATGAAACG AACCTTGGTG GTGTTAAATC TGCTTTACCG TGTCCATGGC
TTTGTGCATG CCCCCTATCC GTGGTTGCTT ACTACCCTGC GGGGGTGGTA TACGATTTGG
CATCGCGCAA CGGGATTGAC GATGCGCCAA AGAGTGTTTT GGAGCTACTC GGCTGTGGAG
AATAATTTCT CACTCTATCA ATCGATTAAA CGGTTTCGCA AGGCCGTAGC CCGTGGGGAT
GGCGCGCTGG ATCGGCTGTT GCAACGTTAC TGTGGCGGTG CGCCGCCGAT CCCGGTTAAA
TAA
|
|---|
| Protein sequence | MALTTVSVVI PVKNEADKLG ACLQAILTQS HEVLEIIVID SGSTDGTQDL AQRFAKVKLV
QIEPAQFNHG ATRNQAIAMT RGEFVLCTVG DAQAVDRFWI ERLLAGFTDD AVVGVCGQQV
VPHRADTNPV EWFRPQSIAT SQRYQFVDAD TFAAAPVEQR KAACSWDNVT ALYRRQAIIE
TPFTTFPYGE DLLWAHAQLN MGRALVYQPS AQVYHYHLMN HQTTMKRTLV VLNLLYRVHG
FVHAPYPWLL TTLRGWYTIW HRATGLTMRQ RVFWSYSAVE NNFSLYQSIK RFRKAVARGD
GALDRLLQRY CGGAPPIPVK
|
|---|
| |