Gene Mmc1_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2422 
Symbol 
ID4480986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3090789 
End bp3091913 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content57% 
IMG OID639723170 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_866328 
Protein GI117925711 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCG TCGATCTCCT TGCCCAGCAT CGGTCCATCC AGGTGTCGTT AGACGCCGCC 
ATTGCCCATG TGGTTGAGCA CTCCAGCTTT ATCCGTGGTC CCCATGTGGA GGCTTTTGAG
CAGGGCTTCG CGCAAATGAT GGGGGCCAAG CACTGTATCT CCTGCGGCAA CGGCACCGAT
GCCCTCTATA TCGCCATGCG TGCGCTGGGG CTGGAGGCCG GGGACGAGGT GATCACCACC
GCCCATAGTT GGATTGCCAC CAGCGAAACC ATCACCCAGG CGGGCGGGCA GGTGGTGTTT
TGCGACACCG AACCCAACTG TTTTTGTCTC GATCCCTTAC AGATTGAATC CAAAATTACC
CCACGCACGC GGGGTATTAT TGCGGTGCAT CTCTATGGTC AGCCTGCGGA TATGTCGGCC
ATTATGGCGC TGGCGAAAGC CTATGACCTG TGGGTGATCG AGGATGCCGC CCAGGCTCAC
TTGGCCGCCA TGGATGGTCA ACTGGTGGGC CGTTTTGGGG ATGTTGCCAC CTTCTCTTTC
TACCCCGGTA AAAATTTGGG TGCCATGGGG GATGCCGGAT GTTTGGTCAC AGACCGGCAG
GATGTGGCGG ATTTTGCCCG CTTGTTTGCC CGCCATGGGG GGAAAAATAA TCATCAAATA
GAGGGTATAA ACAGCCGCAT GGATGGTTTG CAGGCGGCGG TGCTTAATGT CAAAATGCCC
CACCTAGAGG GGTGGACCCG CGCCCGCGAG GCGTTGGCCC AGCGCTATGA TAGCATGCTG
GCCGAGCTGC CCCAGGTCAT CACCCCAACG GTGCGCAGTG GTTGTCGCCA TGTGTATCAT
CTCTATGTCA TCCGGGTGCC GCAGCGGGAT GCCTTGCAAG CCTATTTAGC AGAGCTCTAT
ATTCCCACGG TGATCAACTA CCCTCAGGCG CTGCCTTTCT ACCCAGCCTA TGCGCGGCTT
GGCCACAAGC CGGTGGATTT TCCCGTTGCT TTTCAGCATG CGCAGGAGAT CCTCTCTTTG
CCCATGCACC CCTTTTTAAG TCAACAGGAT CAAGAACGGG TGGTGGAAGG CATTCGCGCC
TTTTATGCGC AACCGGTTTC GATTGCGTTT GAAGAGGGCT CTTGA
 
Protein sequence
MQFVDLLAQH RSIQVSLDAA IAHVVEHSSF IRGPHVEAFE QGFAQMMGAK HCISCGNGTD 
ALYIAMRALG LEAGDEVITT AHSWIATSET ITQAGGQVVF CDTEPNCFCL DPLQIESKIT
PRTRGIIAVH LYGQPADMSA IMALAKAYDL WVIEDAAQAH LAAMDGQLVG RFGDVATFSF
YPGKNLGAMG DAGCLVTDRQ DVADFARLFA RHGGKNNHQI EGINSRMDGL QAAVLNVKMP
HLEGWTRARE ALAQRYDSML AELPQVITPT VRSGCRHVYH LYVIRVPQRD ALQAYLAELY
IPTVINYPQA LPFYPAYARL GHKPVDFPVA FQHAQEILSL PMHPFLSQQD QERVVEGIRA
FYAQPVSIAF EEGS