Gene Mmc1_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2396 
Symbol 
ID4482165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3053282 
End bp3054622 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content61% 
IMG OID639723144 
Product2-oxoglutarate dehydrogenase E2 component 
Protein accessionYP_866302 
Protein GI117925685 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID[TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00741377 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAACGG AAATCAAGGT GCCCACACTT GGTGAATCGG TAACCGAGGC CACTGTCGTA 
CAGTGGCTCA AACAGGTCGG CGATGCCGTT GCTGTTGACG AGCCCTTGGT GGAGTTGGAA
ACCGATAAAG TTACGGTCGA GATGCCCTCG CCGGTGGCCG GAGTTATTAC CGAAATTTAC
GCGGGTGTGG ATGCCGATGT CGAGGTCGGG GCCGTGCTCT GCGTGGTGGA TGCCCAGGGC
AGCGCCCGCG TAGCCGTCCC CGCCAAACCG GCGGCTGAGC CTGCCCCGGC TCCAGCGGTG
GCGACAGCCG CGACACCCGC GCCAGCGGTG GCTACACCGG CCCCAACCGT GCCGGTTGCC
CCCCCCAGCG GCGGAGCCGC CCTCTCCCCA GCGGTGCGTA AACTGCTGGC TGAACATGGC
CTAGATGCCA CGCAAATACC GGCAACGGGT AGCGGTGGAC GACTCACAAA AGGGGATGTA
TTGGCCTATC TTGAGCAGCC AAAACCTGCT CCAACGGCGG CACCAACCCC TGCTCCAACG
GCGGCACCAA CCCCTGCTCC AACGCCAACA CCGGCCCCCG CTCCAATGGC CACCCCGGCA
CTCGCCCCGG CAGCGCAGCT GCCCCCCGCC GTCGAAGGCC CCCGCGAAGA GCGGGTCAAG
ATGTCGCGCC TGCGTCAACG CATTGCCCAG CGTTTGAAGG AGGCGCAAAA CACCGCCGCC
ATGCTCACCA CCTTTAATGA GGTAGACATG ACGGCGGTTA TGGCGCTGCG CAGCCAATAC
AAAGAGGTGT TTGAAAAGCG CAACCATGCC CGTTTGGGTT TTATGTCCTT CTTCGTTAAA
GCGGCCATCT CGGCACTCCA GGAGTTTCCT GCGGTCAATG CTGAGATCCA GGGTAACGAG
ATTGTCTTTA AAAACTACTA TGACATTGGT GTCGCGGTGG GCTCACCCCA GGGCTTGGTG
GTCCCGGTCC TACGGGGGGC GGACGCCATG TCGTTGGCGG GCATTGAATC CACCATCGCG
GGCATGGGCA AACGGGCCCG TGATGGCCAA CTCTCCATGG AGGAGATGAG TGGCGGCACC
TTTACCATCA CCAATGGCGG GATCTTTGGC TCCCTGCTCT CCACGCCCAT TCTTAATACG
CCCCAGTCGG CGATTTTGGG CATGCACAAA ATTCAACAAC GCGCCATGGT CATGCCGGAT
GGCTCCATCC AGGCCCGTCC CATGATGTAT CTGGCACTCT CTTACGACCA CCGCATTGTG
GATGGTAAAG AGGCGGTGAG TTTTCTGGTG CGCATCAAAG ATTGCATCGA GGATCCCGCG
CGGATTCTGC TCAACGCCTA A
 
Protein sequence
MATEIKVPTL GESVTEATVV QWLKQVGDAV AVDEPLVELE TDKVTVEMPS PVAGVITEIY 
AGVDADVEVG AVLCVVDAQG SARVAVPAKP AAEPAPAPAV ATAATPAPAV ATPAPTVPVA
PPSGGAALSP AVRKLLAEHG LDATQIPATG SGGRLTKGDV LAYLEQPKPA PTAAPTPAPT
AAPTPAPTPT PAPAPMATPA LAPAAQLPPA VEGPREERVK MSRLRQRIAQ RLKEAQNTAA
MLTTFNEVDM TAVMALRSQY KEVFEKRNHA RLGFMSFFVK AAISALQEFP AVNAEIQGNE
IVFKNYYDIG VAVGSPQGLV VPVLRGADAM SLAGIESTIA GMGKRARDGQ LSMEEMSGGT
FTITNGGIFG SLLSTPILNT PQSAILGMHK IQQRAMVMPD GSIQARPMMY LALSYDHRIV
DGKEAVSFLV RIKDCIEDPA RILLNA