Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2396 |
Symbol | |
ID | 4482165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3053282 |
End bp | 3054622 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639723144 |
Product | 2-oxoglutarate dehydrogenase E2 component |
Protein accession | YP_866302 |
Protein GI | 117925685 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00741377 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCAACGG AAATCAAGGT GCCCACACTT GGTGAATCGG TAACCGAGGC CACTGTCGTA CAGTGGCTCA AACAGGTCGG CGATGCCGTT GCTGTTGACG AGCCCTTGGT GGAGTTGGAA ACCGATAAAG TTACGGTCGA GATGCCCTCG CCGGTGGCCG GAGTTATTAC CGAAATTTAC GCGGGTGTGG ATGCCGATGT CGAGGTCGGG GCCGTGCTCT GCGTGGTGGA TGCCCAGGGC AGCGCCCGCG TAGCCGTCCC CGCCAAACCG GCGGCTGAGC CTGCCCCGGC TCCAGCGGTG GCGACAGCCG CGACACCCGC GCCAGCGGTG GCTACACCGG CCCCAACCGT GCCGGTTGCC CCCCCCAGCG GCGGAGCCGC CCTCTCCCCA GCGGTGCGTA AACTGCTGGC TGAACATGGC CTAGATGCCA CGCAAATACC GGCAACGGGT AGCGGTGGAC GACTCACAAA AGGGGATGTA TTGGCCTATC TTGAGCAGCC AAAACCTGCT CCAACGGCGG CACCAACCCC TGCTCCAACG GCGGCACCAA CCCCTGCTCC AACGCCAACA CCGGCCCCCG CTCCAATGGC CACCCCGGCA CTCGCCCCGG CAGCGCAGCT GCCCCCCGCC GTCGAAGGCC CCCGCGAAGA GCGGGTCAAG ATGTCGCGCC TGCGTCAACG CATTGCCCAG CGTTTGAAGG AGGCGCAAAA CACCGCCGCC ATGCTCACCA CCTTTAATGA GGTAGACATG ACGGCGGTTA TGGCGCTGCG CAGCCAATAC AAAGAGGTGT TTGAAAAGCG CAACCATGCC CGTTTGGGTT TTATGTCCTT CTTCGTTAAA GCGGCCATCT CGGCACTCCA GGAGTTTCCT GCGGTCAATG CTGAGATCCA GGGTAACGAG ATTGTCTTTA AAAACTACTA TGACATTGGT GTCGCGGTGG GCTCACCCCA GGGCTTGGTG GTCCCGGTCC TACGGGGGGC GGACGCCATG TCGTTGGCGG GCATTGAATC CACCATCGCG GGCATGGGCA AACGGGCCCG TGATGGCCAA CTCTCCATGG AGGAGATGAG TGGCGGCACC TTTACCATCA CCAATGGCGG GATCTTTGGC TCCCTGCTCT CCACGCCCAT TCTTAATACG CCCCAGTCGG CGATTTTGGG CATGCACAAA ATTCAACAAC GCGCCATGGT CATGCCGGAT GGCTCCATCC AGGCCCGTCC CATGATGTAT CTGGCACTCT CTTACGACCA CCGCATTGTG GATGGTAAAG AGGCGGTGAG TTTTCTGGTG CGCATCAAAG ATTGCATCGA GGATCCCGCG CGGATTCTGC TCAACGCCTA A
|
Protein sequence | MATEIKVPTL GESVTEATVV QWLKQVGDAV AVDEPLVELE TDKVTVEMPS PVAGVITEIY AGVDADVEVG AVLCVVDAQG SARVAVPAKP AAEPAPAPAV ATAATPAPAV ATPAPTVPVA PPSGGAALSP AVRKLLAEHG LDATQIPATG SGGRLTKGDV LAYLEQPKPA PTAAPTPAPT AAPTPAPTPT PAPAPMATPA LAPAAQLPPA VEGPREERVK MSRLRQRIAQ RLKEAQNTAA MLTTFNEVDM TAVMALRSQY KEVFEKRNHA RLGFMSFFVK AAISALQEFP AVNAEIQGNE IVFKNYYDIG VAVGSPQGLV VPVLRGADAM SLAGIESTIA GMGKRARDGQ LSMEEMSGGT FTITNGGIFG SLLSTPILNT PQSAILGMHK IQQRAMVMPD GSIQARPMMY LALSYDHRIV DGKEAVSFLV RIKDCIEDPA RILLNA
|
| |