| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2371 |
|---|
| Symbol | |
|---|
| ID | 4481535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3009412 |
|---|
| End bp | 3009924 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639723119 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866277 |
|---|
| Protein GI | 117925660 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.221129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGGC GTCTGCACAT AGGCATCATC TTGCTGCTGC TAGGCGTGCC GTGTTTTGCA
TGGGCTGAGG ATCTGCGTGC GTTATCCCTA AAAGGTGCTT ACCTTTACAA CATCTCTAAA
TTTGTCTATT GGCCAAGCGA GCAGCAAGGC GCCCTACACC TGTGTGTGTG GGGGGATGCC
CCCTTGCAAG GGGTGATGGC CAAGATGCTC ACCGGTAAGC GGGTGGCGGG GCGTGGGGTG
ACGGTGGTGG GCGAGCAAGC CAGTAGTAAA GTGTGCCAAC TGCTCTATCT GGGCGAGGGC
TGGCAGGGGG ACGCGACGAC GTTGCAAGCG CTTAATCATA AGGGGTTGGT GACGGTCTCG
GACCACCCCG ATTTTCTGGC TTTGGGGGGG ATTGTGCAGC TGGTCGAGCA ACAAAACCGT
TTAAAATTCC GGATTCATCA GGGTCATGCT GAGGCCATGT CGGTGCAGTT TGCCGCCAAG
CTTATGCAGT TGGCGCTGGA GATTGTACCT TGA
|
|---|
| Protein sequence | MLRRLHIGII LLLLGVPCFA WAEDLRALSL KGAYLYNISK FVYWPSEQQG ALHLCVWGDA
PLQGVMAKML TGKRVAGRGV TVVGEQASSK VCQLLYLGEG WQGDATTLQA LNHKGLVTVS
DHPDFLALGG IVQLVEQQNR LKFRIHQGHA EAMSVQFAAK LMQLALEIVP
|
|---|
| |