| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2321 |
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| Symbol | |
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| ID | 4482777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2952409 |
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| End bp | 2954997 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639723069 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_866227 |
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| Protein GI | 117925610 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.10527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.723891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAA ATCATACAGA CAAGAGTGCA CCGACAAAAG GTGCGGCGAA ACCAAAACGT
AAATCCCGTT GGATATGGCG CTGGTTTAAG CGTCTCTTTG TGCTGGGGCT GTTACTGACC
CTGGGCGGGG GGATCTATGG TTGGTCCATC TATCTTAAAT TTTCCCGCGA TCTGCCCTCG
CTGCGCAGCT TGCAGGATTA TCACCCTTCA TTGGTAACGC GGGTCTATGC GCGGGACTAT
CGTTTGATGG GCGAGTTCTA CATTGAACGA CGCAAATTTA TTCCCATCAA AGATGTTCCC
CCCATGCTGG TCAACGCCTT CCTCGCCACG GAGGACGCCC GCTTTTACAG CCATTTTGGC
TTAGACCCCG TGGGCATCCT ACGCGCCTTT ATCACCAACG CCATCGCTGG ACGGGTGGTG
CAAGGGGCCT CGACCATCAC CCAACAGGTG GCCAAAACCT TTCTGCTCAC CGCCGAGCGA
AGCTATACCC GCAAAATTAA AGAGGCCATC CTTGCCCTGC GCATCGAAGA GACCCTCACT
AAAGAGGAGA TCTTGGAGCT CTACATCAAC CAGATCTATC TGGGGGCCGG GGCCTATGGG
GTTGGCTCGG CTGCACGCAT CTACTTTAAT AAAGATGTTT CAGAGTTAAG CATTGCCCAG
ATGGCGATGC TGGCCGCGCT GCCCAAAGCG CCCTCTCGCT ACTCGCCATG GAACTATGAA
AAGCGCGCTA AAACCCGTCA ATTGGTGATC TTGCAGCGCA TGTTTGACGT GGGCCAAATC
ACCCGTGAAC AGGCCATTGA AGAGGCCGCC CGCCCCCTGG AGTTAGCCCG CCCCCAGGTG
CCCCTGGAAC AGGTTGCACC CCACTATCTG GAACATGTAC GGCGCACCCT GTTAGAAGAG
TGGGGCTCTA GCCGTCTCTA CCGGGGTGGG CTGGATGTCT ACACCACCCT GGACCCAACC
CTACAGGTGG CCGCCCAACA AGCCGTGCGG GATGGGCTGG TGGCCTATAG CCAGCGGCAT
GGTTATATGG GCCCTATGGG CAAACTGGAG AGTGTGGATA AAGCCAGCCT CGCTAAATGG
CTGGAGCAGG TGGAAAAAGA TCCGGTCACC ACGCAAGGTT TTGTGAAGGC CGTGGTGTTG
GAGGTTCCCC CTCAGGGGGC GGCCAAAATC ATGCTCGCCA AGGGGCACAC TTTTGATTTA
CCTTTCTCCG CTGTCGCTTG GGCCAGACCC CGCACGGAAA AGGATTTAAT GCCCGGCAAA
GCCATTGATA AAATAAGCGC TATTTTATCA CCTGGTGACA TCATTTTGGT GGATCTTAAA
CCGGCGTTAA CCCCCAATGC CAAAGGGGAT CTGGAGCCCG GCCATCAGGC TATTTTAGCG
CAGGAGCCCG ATGCCGAAGC CGCCCTCATC AGCATGGACC CCAACACCGG GCAAATTATC
GCCATGGTGG GGGGGTATGA CTATTCCAAC AGTGAGTATA ACCGCGCCAC CCAATCCAAA
CGGTTGCCCG GTTCGGCCTT TAAACCGTTC ATTTATGCTG CGGCTCTCAG CCAGGGTTAC
ACCCCGGCCA GCCGCATTGA TGATGCACCC ATCCCCATTG TCTATCGCGA TAGTGTGACC
GGCGAGCGCA AGATCTGGAA AGCGGAAAAC TATGAACGCC GCTTCTACGG CCCAACCACG
CTGCGGGTAG CGTTAGAACA TTCACGCAAC TTGGTGACCA TCCGCCTCCT AAAAAACCTG
GGTGTGCGGC AGGTGGTGCC TTTTGTGGAA AAATTTGGTC TGGATATTCC TGAAGCCCGT
CAAGATCTCT CCATCGCTCT GGGCACCATG AACTATTCAC CCATGGAGAT GGCCCAAGCC
TATGCAGCCT TTCCCAATGG CGGTAAGTTG GTGGAGCCGG TCTATATAGC ACGGGTGCAA
GACCGTTATG GACGCACCAT TTTTCGCCAT CGTAGCGGCG ACTGCCAGCT CTGCCATAAA
GAGACCGAAC GTTCCATCAC CAACATGTTA GAGGGGCGGG ATAAAGATCT GCCCAAGGGC
CACGAAAATA TGTTTGGAGA ACAGGTTATG GAGCCCCAGG TAGCCTATCA GATCACCAAC
ATGCTCAAGG GCGTCATTAC CCATGGCACC GGCCAAAAGG CGCGGGTTAT CAACCGTCCC
TTGGCGGGTA AAACCGGCAC CACCAACGAT CTGCGGGACG CTTGGTTCCT TGGCTTTAGC
CCCTCCTTAG TCACCTCGGT ATGGGTAGGT CGAGATGACT ATGCTACCCT GGGTTATAAA
GAGACCGGTG CCCGTGCGGC GTTGCCAATC TGGATCGACT ATATGCAAGA GGCACTCAAA
GACCGCCCCA TTGTGGATTT CCCCGTACCT CCCGGCATCT ATTTAGAGTC GGTGGATGGC
GACAGTGGCG GCCCCGTGAC CGATGCCACC AAGCGGGTGG TGCTGGAAGC GTTTAAACCT
GAAGATCGTC AGGTTCGCGC TCAAGAGATG CGTCAATTTA ACCCCAATGG GCGCAGCGAC
CCCATGCAGC AAGGCAGCCC TATGGGCAGC GCCACCGATG GCGGTTCCAT TCCCTCTGGG
CTTTACTAA
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| Protein sequence | MPENHTDKSA PTKGAAKPKR KSRWIWRWFK RLFVLGLLLT LGGGIYGWSI YLKFSRDLPS
LRSLQDYHPS LVTRVYARDY RLMGEFYIER RKFIPIKDVP PMLVNAFLAT EDARFYSHFG
LDPVGILRAF ITNAIAGRVV QGASTITQQV AKTFLLTAER SYTRKIKEAI LALRIEETLT
KEEILELYIN QIYLGAGAYG VGSAARIYFN KDVSELSIAQ MAMLAALPKA PSRYSPWNYE
KRAKTRQLVI LQRMFDVGQI TREQAIEEAA RPLELARPQV PLEQVAPHYL EHVRRTLLEE
WGSSRLYRGG LDVYTTLDPT LQVAAQQAVR DGLVAYSQRH GYMGPMGKLE SVDKASLAKW
LEQVEKDPVT TQGFVKAVVL EVPPQGAAKI MLAKGHTFDL PFSAVAWARP RTEKDLMPGK
AIDKISAILS PGDIILVDLK PALTPNAKGD LEPGHQAILA QEPDAEAALI SMDPNTGQII
AMVGGYDYSN SEYNRATQSK RLPGSAFKPF IYAAALSQGY TPASRIDDAP IPIVYRDSVT
GERKIWKAEN YERRFYGPTT LRVALEHSRN LVTIRLLKNL GVRQVVPFVE KFGLDIPEAR
QDLSIALGTM NYSPMEMAQA YAAFPNGGKL VEPVYIARVQ DRYGRTIFRH RSGDCQLCHK
ETERSITNML EGRDKDLPKG HENMFGEQVM EPQVAYQITN MLKGVITHGT GQKARVINRP
LAGKTGTTND LRDAWFLGFS PSLVTSVWVG RDDYATLGYK ETGARAALPI WIDYMQEALK
DRPIVDFPVP PGIYLESVDG DSGGPVTDAT KRVVLEAFKP EDRQVRAQEM RQFNPNGRSD
PMQQGSPMGS ATDGGSIPSG LY
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