Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2296 |
Symbol | |
ID | 4480916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2927151 |
End bp | 2928179 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639723045 |
Product | Sel1 domain-containing protein |
Protein accession | YP_866203 |
Protein GI | 117925586 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.207765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACTGA GTAGTCATCA CCTACTTCTT TTCACGTTTA TCCATGGATT GAATGGCATG GCACACCCCT TTCGACTTCC CTTGGTTCCG AGCCTGCTGG TGATACTGGC GGCATTGATG TTGGTACGCA CGGTAGCACC TCGTGACAAG ATCGTTGTGA TTGAGGATAC CAGATCTACT GCGTTGGCCG CTACGGCGCA GCCACGGCAA GAACGGACTC TCCCGCGCGT TCCCCAACAA GCCGCAGCCA AGTCGCCCGC GATCTCGACG ACTGTATCTG CCCAAGCCTC TGCCACGCCG CCTAAACCCA TGGCAGGGGT GGGGGGGGAT GCGGCGGCCA CCAATCTTTG CGACCGTTTG GCCGCCTCGC CCGATGATCC TCAGCGGGTT AGTCCAGGCG TTATGCTTGA GCCGACCACC ATAGGGGATG CGGAGTCAGC TTGCCGCGAG ATGGTGGAAA ACGCACCCAA AGAAGGCAGG TATTTCTACC AGTTGGGGCG CATTTTGGAG GCCAAATCGG CTTGGCGTGG GGCGCGGGAT GCCCACCAGC AAGCCTCCAA TGTGTGGTAT GCCATGGGTA GTTATCGGTT GGGCATGTTG CTGTTAAGCG GCAAGGGTGG CGCACAGGAT ATTCATGCTG GTTTGCGGTT GCTGCAAAAG GCGGCGCTGG CCAAATTGCC GCCTGCCCAA AATGCCATAG GGGTGCATTT GGCCAATGGG CGGTTGGTCA AACGCAATAT GCGTGAAGCG GTGCGCTGGT TACGCCAAGC GGCCATGGGT GGTTATGCCC CAGGGATGCA TAATCTATCC CGGGCATTAA TGTCACCCCG CTCTGGAACC GATGGGCGGC AAGAGGCGTT GGTTTGGCTG CGTAAAGCGG CAGATCGGGG TGTGGCCGAG GCGCAATATG ATCTAGGCAT GTTGTATGAG CGGGGGAACA TGGTGCCCAA GGATGCCGCA GAGGCCAAGT TGTGGTTGGG TAAAGCGGCC AAACAGGGGC ATGTGAGGGC GCTCAAACAG CTTGAGTAA
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Protein sequence | MVLSSHHLLL FTFIHGLNGM AHPFRLPLVP SLLVILAALM LVRTVAPRDK IVVIEDTRST ALAATAQPRQ ERTLPRVPQQ AAAKSPAIST TVSAQASATP PKPMAGVGGD AAATNLCDRL AASPDDPQRV SPGVMLEPTT IGDAESACRE MVENAPKEGR YFYQLGRILE AKSAWRGARD AHQQASNVWY AMGSYRLGML LLSGKGGAQD IHAGLRLLQK AALAKLPPAQ NAIGVHLANG RLVKRNMREA VRWLRQAAMG GYAPGMHNLS RALMSPRSGT DGRQEALVWL RKAADRGVAE AQYDLGMLYE RGNMVPKDAA EAKLWLGKAA KQGHVRALKQ LE
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