Gene Mmc1_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2187 
Symbol 
ID4483928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2741262 
End bp2742269 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content51% 
IMG OID639722932 
Producthypothetical protein 
Protein accessionYP_866094 
Protein GI117925477 
COG category 
COG ID 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00020758 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGT TGATTTTGGT TACAACGCTG TTTTTAGCCC CTTTGCTGGT GTTTGTGGGG 
CTAGACTTGC AACAGGTTGC CCATTATTTT GAGCGGGTTG GGGTGGGGCA TCTGCTGCTG
TTTGTTTTGC TGGTCCTGCT CTCTACACTC ATGCGTACCC TGCGTTATCG CTTGGTGCTG
CGCATCCCTA TCGCCTTCCG CACCCTATTG GGTATCCTGC TGCTGCACCA GTTCTATGTT
ACCTTTCTAC CCATGCGTAT AGGGGAAATA AGCATTCCGC TGCTCCTAAA ACAGGAGGGG
GTGCGCATTT CAAAATCAAT CGGCCACGTC ATTTTTTTAC GCGTGGTTGA TTTGATGAAC
ATTTTGCTGT GGGTGGTGGT GCTAGGGCTG CTGTTTCGCA GCGAACTTTC TGCCCCATTG
GCGCACGGTG TCGAGGTGTT GGTCTCGATT GGGGCGCTGC TGCTGTTGGT TATCCCGGTC
TTTATCTTGT GCATGCCGCA CATCAATAGG CGTATTGCTT GGCAAACATG GTTACCCATG
GCCTTTAGGC AAAAACTCGC GCCGTTGCTC GTCTCCATGG GGCGCGTTTT TTACCGTCAG
TCCCCCAGAA CGCTTGTGTG GGTTATCGCG CTGACCACTG CTGCGACAGC GTTCAGTATC
CTCTTCATCG TACTGCTGGC GCAGTTATGG ATACCCGAAA TAAGTTGGTC GCTGATCTCT
ATGGCCGCAA GCTTTGGTGC TTTAAGCTCG ATTTTGCCAA TCAATGGTCT GGCCGGGTTG
GGTGGGCAGC AGGTGATTTC GGTGGCTATG TATAGTCAAA TGGGCTTAAG CGCGCAGGAA
GCGCTGGCTT TTACCATGGC GGCTTCTGTA CTGGTTCTCT TTATTATTAT GGGTACAGGC
TTTTTGGGGG CGTTCTTGAT CTATAAGCCA GGGCCGGGTA AAAGCATACT TGATCTGTTC
AAACTCAGGC GTGCTTCTGT TTCTTCCAAA GATGGATCAA CGGCCTAA
 
Protein sequence
MLKLILVTTL FLAPLLVFVG LDLQQVAHYF ERVGVGHLLL FVLLVLLSTL MRTLRYRLVL 
RIPIAFRTLL GILLLHQFYV TFLPMRIGEI SIPLLLKQEG VRISKSIGHV IFLRVVDLMN
ILLWVVVLGL LFRSELSAPL AHGVEVLVSI GALLLLVIPV FILCMPHINR RIAWQTWLPM
AFRQKLAPLL VSMGRVFYRQ SPRTLVWVIA LTTAATAFSI LFIVLLAQLW IPEISWSLIS
MAASFGALSS ILPINGLAGL GGQQVISVAM YSQMGLSAQE ALAFTMAASV LVLFIIMGTG
FLGAFLIYKP GPGKSILDLF KLRRASVSSK DGSTA