Gene Mmc1_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2162 
Symbol 
ID4483973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2655487 
End bp2658633 
Gene Length3147 bp 
Protein Length1048 aa 
Translation table11 
GC content63% 
IMG OID639722906 
ProductTPR repeat-containing protein 
Protein accessionYP_866069 
Protein GI117925452 
COG category[R] General function prediction only 
COG ID[COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.354443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATGGG GTGAGCGTAA AATGTGTGAC CGGGTAGCGG TGCAGCGACA GCTGATGAGC 
GTTGCGGTTA TGGTTATGGG CCTATTTATG GGGCAATCTT CAGCTATGGC CGAGGATGCC
CTGAGTTTGG CAGAAAAAGG CGTTTTAGCC AGCAGTAAGG GCGAGCAAGA GCAGGCATTG
GAGCTTTTTA ATAGGGCTTT GTCGCTGGGG CAACTGGATA AGGTTGGTCA GGCGGTGGTC
TTGAGTAACC GTGGCGAGCT TAACCTGGAC GAAAATCTTT TTGAAGAGGC GCGCAAAGAT
TTTATTGAGG CGCTCAAATT ATGGCCCCTG ACCCATAAGG CCCGTTTAGG GCTTGGTCAA
TTGGCGGTGA TGCAAGGCGC GTGGCAAGAG GGTGCCGAGC AGCTACAGCG CTACGTGGAT
CAAGTCACTC GTTACCGCCG GAGTGAGGGT TTGCTCTGGT TACATCTTGC TCAGCTTGGC
ATGCAGAAGG GGGACGCAGC AGCCCTTTTT AAAGGGGATC AAGCCGCCCA ACAGCGCACG
CCATGGCAGC AAAAAATTAT GGATTTTCAC CTAGGCAAGT TGGAGGCAGC CAAGTTGCTG
CAAGAGGTGC AGGGTCATCG TGCGCAGGCT GCTTATCATG TCGCGGTGGT TGCCCAGATA
AAGGGGGATT GGGCGGCGGC AAAGCAGAAC TATGTCGTGG CAGCAAAAGA TTCAACAGGG
GGGCGCTATG GGGCAGCAGC CAGACAACAA CTCGTGTTGG TAGAGAGTCA GTTAGCCCAA
CAACCCACCA CTGAACAACC GGCAGCAGCG GTGAAGGCCG CCGCCGAACA GGCTGCCGCC
GAACAGGCTG CCGCCGAACA GGCTGCCGCC GAACAGGCCG CCGCCGAACA GGCCGTCGCC
GAGAAGGTCG CCGCCGAACA GGCCGCCGCC GAGAAGGTCG CCGCCGAACA GGCCGCCGCC
GAACAGGCTG TCGCCGAACA GGCTGCTGCC GAACAAGCCG CCGCCGAACA GGCCGCCGCC
GAACAGGCCG CCGCCGAGCA GGCCGCCGCC GAACAGGCCG CTGCCGAACA GGCCGCTGCC
GAACAGGCCG CCGCCGAGCA GGCCGCTGCC GAACAGGCCG CTGCTGAGAA GGCCGCCGCC
GAACAGGCCG CTGCTGAGAA GGCCGCTGCC GAGCAGGCCG CTGCCGAAAA GGCTGCTGCC
GAAAAGGCCG CCGCCGAACA GGCTGCTGCC GAAAAGGCCG CCGCCGAACA GGCTGCTGCC
GAAAAGGCCG CCGCCGAACA GGCTGCCGCC GAACAGGCCG CCGCTGAACA GGCCGCCGCC
GAACAGGCTG CCGCTGAAAA GGCTGCTGCT GAAAAGGCTG CTGCCGAAAA GGCTGCTGCT
GAGAAGGCCG CCGCTGAGAA GGCCGCCGCC GAACAAGCCG CCGCCGAGCA GGCTGCTGCC
GAAAAGGCTG CTGCTGAACA AGCCGCCGCC GAACAGGCCG CCGCCGAACA GGCTGCTGCT
GAGAAGGCCG CCGCCGAACA GGCTGCTGCC GAAAAGGCTG CTGCTGAACA AGCCGCCGCT
GAGCAGGCCG CCGCCGAACA GGCTGCTGCT GAGAAGGCCG CCGCCGAACA AGCCGCCGCC
GAACAGGCTG CTGCCGAAAA GGCCGCCGCC GAACAGGCTG CTGCCGAAAA GGCCGCTGCC
GAACAGGCCG CTGCTGAGAA GGCCGCTGCT GAGAAGGCCG CCGCCGAGCA GGCTGCCGCC
GAGCAGGCCG CTGCCGAACA AGTAGCCGCC GAACAAGCTG CCGCCGAACA AGCCGCCGCC
GAACAAGCCG CCGCCGAACA AGCTGCCGCC GAACAGGCTG CCGCCGAACA GGCCGCTGCC
GAACAAGTAG CCGCCGAACA AGCTGCCGCC GAACAAGCCG CCGCCGAACA AGCCGCCGCC
GAACAAGCTG CCGCCGAACA GGCTGCCGCC GAACAGGCCG CCGCTGAGAA GGCTGCTGCT
GAGAAGGCTG CCGCCGAGAA GGCTGCCGCC GAGAAGGCTG CCGCCGAGCA GGCCGCTGCC
GAACAGGCTG CCGCCGAACA GGCTGCCGCC GAGCAGGCCG CTGCCGAACA GGCTGCCGCC
GAACAAGCCG CCGCCGAACA GGCCGCTGCC GAACAAGCCG CCGCCGAACA GGCCGCTGCC
GAACAAGCCG CCGCCGAACA GGCTGCCGCC GAACAGGCTG CCGCCGAACA GGCTGCCGCC
GAACAGGCTG CCGCCGAACA GGCCGCCGCT GAGAAGGCCG CCGCTGAGAA GGCCGCCGCT
GAGAAGGCCG CCGCCGAACA GGCTGCTGCT GAGAAGGCCG CCGCCGAACA AGCCGCCGCC
GAACAGGCTG CTGCTGAGAA GGCTGGCTCT GCGGGTGCGC TACCCCCAGA AAGTAAGCTT
GAGAAAGGGA TGGTGCCCCC TAAGCAGAAA ACCATAGCTG AGGTTTATAT GGGGGGATCG
GGTGAAAAAC AGGCTCTGCT TGAGCCCGCA AGCCCTCAGG CGCTAAGCGA TAGAGCTAAC
GGAGAGGAAC TTTACGCTCC CCAACCTGCG ATGCAGCAAC AGAGCGGAGC TCCTTTAACC
AACCAAGCCG CGCGCTCTGA GCAAACGGCT AGCAGCCCTA CCGAGCCAGT GCCAACAGCC
ACAGAAATCA CCACAGAGAC CGCCACGGAA AACGAGCGGC TAAAACAGGT TATTCTTAAC
GCGCCGGTGC TTGATCTACC CCAACCCGTG CTTGAGCCCA AAAGCATCCC TGCACAACCC
GCTACAGAAG ACAAACAACC CATTCCACCT GCCGCATCAA GCCCCGCAAC CTCCACACCC
CCCAAACAGG TTGAACCCAC ACAAAACCCA GTAACCGTAC CTGCGCTTCC ACAACCCGAT
GAAGTGCAAA GCAAAAATTA TAATAATGTC TACGTCATTG ATCTGGGATC CTATAGTAAC
ATGCAGTGGT ATGAAGAGAA CCTACAGCAG GTCAAAGAGG CCCGGCTTCG CTATTATGTG
CATACCATCA GCCATGACAA CACCCGCTAT AAACGCCTGC GGGTCGGCCC GTATACCACC
AAACAACAGC TCAATAATGC TTGGCGAACG CTCTTTCTAG AGACTGACCT GCGGCCAGCC
CGCATCCTAA AATTGGTGCA ACCCTAA
 
Protein sequence
MAWGERKMCD RVAVQRQLMS VAVMVMGLFM GQSSAMAEDA LSLAEKGVLA SSKGEQEQAL 
ELFNRALSLG QLDKVGQAVV LSNRGELNLD ENLFEEARKD FIEALKLWPL THKARLGLGQ
LAVMQGAWQE GAEQLQRYVD QVTRYRRSEG LLWLHLAQLG MQKGDAAALF KGDQAAQQRT
PWQQKIMDFH LGKLEAAKLL QEVQGHRAQA AYHVAVVAQI KGDWAAAKQN YVVAAKDSTG
GRYGAAARQQ LVLVESQLAQ QPTTEQPAAA VKAAAEQAAA EQAAAEQAAA EQAAAEQAVA
EKVAAEQAAA EKVAAEQAAA EQAVAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA
EQAAAEQAAA EQAAAEKAAA EQAAAEKAAA EQAAAEKAAA EKAAAEQAAA EKAAAEQAAA
EKAAAEQAAA EQAAAEQAAA EQAAAEKAAA EKAAAEKAAA EKAAAEKAAA EQAAAEQAAA
EKAAAEQAAA EQAAAEQAAA EKAAAEQAAA EKAAAEQAAA EQAAAEQAAA EKAAAEQAAA
EQAAAEKAAA EQAAAEKAAA EQAAAEKAAA EKAAAEQAAA EQAAAEQVAA EQAAAEQAAA
EQAAAEQAAA EQAAAEQAAA EQVAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEKAAA
EKAAAEKAAA EKAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA
EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EKAAAEKAAA EKAAAEQAAA EKAAAEQAAA
EQAAAEKAGS AGALPPESKL EKGMVPPKQK TIAEVYMGGS GEKQALLEPA SPQALSDRAN
GEELYAPQPA MQQQSGAPLT NQAARSEQTA SSPTEPVPTA TEITTETATE NERLKQVILN
APVLDLPQPV LEPKSIPAQP ATEDKQPIPP AASSPATSTP PKQVEPTQNP VTVPALPQPD
EVQSKNYNNV YVIDLGSYSN MQWYEENLQQ VKEARLRYYV HTISHDNTRY KRLRVGPYTT
KQQLNNAWRT LFLETDLRPA RILKLVQP