Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2162 |
Symbol | |
ID | 4483973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2655487 |
End bp | 2658633 |
Gene Length | 3147 bp |
Protein Length | 1048 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639722906 |
Product | TPR repeat-containing protein |
Protein accession | YP_866069 |
Protein GI | 117925452 |
COG category | [R] General function prediction only |
COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.354443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATGGG GTGAGCGTAA AATGTGTGAC CGGGTAGCGG TGCAGCGACA GCTGATGAGC GTTGCGGTTA TGGTTATGGG CCTATTTATG GGGCAATCTT CAGCTATGGC CGAGGATGCC CTGAGTTTGG CAGAAAAAGG CGTTTTAGCC AGCAGTAAGG GCGAGCAAGA GCAGGCATTG GAGCTTTTTA ATAGGGCTTT GTCGCTGGGG CAACTGGATA AGGTTGGTCA GGCGGTGGTC TTGAGTAACC GTGGCGAGCT TAACCTGGAC GAAAATCTTT TTGAAGAGGC GCGCAAAGAT TTTATTGAGG CGCTCAAATT ATGGCCCCTG ACCCATAAGG CCCGTTTAGG GCTTGGTCAA TTGGCGGTGA TGCAAGGCGC GTGGCAAGAG GGTGCCGAGC AGCTACAGCG CTACGTGGAT CAAGTCACTC GTTACCGCCG GAGTGAGGGT TTGCTCTGGT TACATCTTGC TCAGCTTGGC ATGCAGAAGG GGGACGCAGC AGCCCTTTTT AAAGGGGATC AAGCCGCCCA ACAGCGCACG CCATGGCAGC AAAAAATTAT GGATTTTCAC CTAGGCAAGT TGGAGGCAGC CAAGTTGCTG CAAGAGGTGC AGGGTCATCG TGCGCAGGCT GCTTATCATG TCGCGGTGGT TGCCCAGATA AAGGGGGATT GGGCGGCGGC AAAGCAGAAC TATGTCGTGG CAGCAAAAGA TTCAACAGGG GGGCGCTATG GGGCAGCAGC CAGACAACAA CTCGTGTTGG TAGAGAGTCA GTTAGCCCAA CAACCCACCA CTGAACAACC GGCAGCAGCG GTGAAGGCCG CCGCCGAACA GGCTGCCGCC GAACAGGCTG CCGCCGAACA GGCTGCCGCC GAACAGGCCG CCGCCGAACA GGCCGTCGCC GAGAAGGTCG CCGCCGAACA GGCCGCCGCC GAGAAGGTCG CCGCCGAACA GGCCGCCGCC GAACAGGCTG TCGCCGAACA GGCTGCTGCC GAACAAGCCG CCGCCGAACA GGCCGCCGCC GAACAGGCCG CCGCCGAGCA GGCCGCCGCC GAACAGGCCG CTGCCGAACA GGCCGCTGCC GAACAGGCCG CCGCCGAGCA GGCCGCTGCC GAACAGGCCG CTGCTGAGAA GGCCGCCGCC GAACAGGCCG CTGCTGAGAA GGCCGCTGCC GAGCAGGCCG CTGCCGAAAA GGCTGCTGCC GAAAAGGCCG CCGCCGAACA GGCTGCTGCC GAAAAGGCCG CCGCCGAACA GGCTGCTGCC GAAAAGGCCG CCGCCGAACA GGCTGCCGCC GAACAGGCCG CCGCTGAACA GGCCGCCGCC GAACAGGCTG CCGCTGAAAA GGCTGCTGCT GAAAAGGCTG CTGCCGAAAA GGCTGCTGCT GAGAAGGCCG CCGCTGAGAA GGCCGCCGCC GAACAAGCCG CCGCCGAGCA GGCTGCTGCC GAAAAGGCTG CTGCTGAACA AGCCGCCGCC GAACAGGCCG CCGCCGAACA GGCTGCTGCT GAGAAGGCCG CCGCCGAACA GGCTGCTGCC GAAAAGGCTG CTGCTGAACA AGCCGCCGCT GAGCAGGCCG CCGCCGAACA GGCTGCTGCT GAGAAGGCCG CCGCCGAACA AGCCGCCGCC GAACAGGCTG CTGCCGAAAA GGCCGCCGCC GAACAGGCTG CTGCCGAAAA GGCCGCTGCC GAACAGGCCG CTGCTGAGAA GGCCGCTGCT GAGAAGGCCG CCGCCGAGCA GGCTGCCGCC GAGCAGGCCG CTGCCGAACA AGTAGCCGCC GAACAAGCTG CCGCCGAACA AGCCGCCGCC GAACAAGCCG CCGCCGAACA AGCTGCCGCC GAACAGGCTG CCGCCGAACA GGCCGCTGCC GAACAAGTAG CCGCCGAACA AGCTGCCGCC GAACAAGCCG CCGCCGAACA AGCCGCCGCC GAACAAGCTG CCGCCGAACA GGCTGCCGCC GAACAGGCCG CCGCTGAGAA GGCTGCTGCT GAGAAGGCTG CCGCCGAGAA GGCTGCCGCC GAGAAGGCTG CCGCCGAGCA GGCCGCTGCC GAACAGGCTG CCGCCGAACA GGCTGCCGCC GAGCAGGCCG CTGCCGAACA GGCTGCCGCC GAACAAGCCG CCGCCGAACA GGCCGCTGCC GAACAAGCCG CCGCCGAACA GGCCGCTGCC GAACAAGCCG CCGCCGAACA GGCTGCCGCC GAACAGGCTG CCGCCGAACA GGCTGCCGCC GAACAGGCTG CCGCCGAACA GGCCGCCGCT GAGAAGGCCG CCGCTGAGAA GGCCGCCGCT GAGAAGGCCG CCGCCGAACA GGCTGCTGCT GAGAAGGCCG CCGCCGAACA AGCCGCCGCC GAACAGGCTG CTGCTGAGAA GGCTGGCTCT GCGGGTGCGC TACCCCCAGA AAGTAAGCTT GAGAAAGGGA TGGTGCCCCC TAAGCAGAAA ACCATAGCTG AGGTTTATAT GGGGGGATCG GGTGAAAAAC AGGCTCTGCT TGAGCCCGCA AGCCCTCAGG CGCTAAGCGA TAGAGCTAAC GGAGAGGAAC TTTACGCTCC CCAACCTGCG ATGCAGCAAC AGAGCGGAGC TCCTTTAACC AACCAAGCCG CGCGCTCTGA GCAAACGGCT AGCAGCCCTA CCGAGCCAGT GCCAACAGCC ACAGAAATCA CCACAGAGAC CGCCACGGAA AACGAGCGGC TAAAACAGGT TATTCTTAAC GCGCCGGTGC TTGATCTACC CCAACCCGTG CTTGAGCCCA AAAGCATCCC TGCACAACCC GCTACAGAAG ACAAACAACC CATTCCACCT GCCGCATCAA GCCCCGCAAC CTCCACACCC CCCAAACAGG TTGAACCCAC ACAAAACCCA GTAACCGTAC CTGCGCTTCC ACAACCCGAT GAAGTGCAAA GCAAAAATTA TAATAATGTC TACGTCATTG ATCTGGGATC CTATAGTAAC ATGCAGTGGT ATGAAGAGAA CCTACAGCAG GTCAAAGAGG CCCGGCTTCG CTATTATGTG CATACCATCA GCCATGACAA CACCCGCTAT AAACGCCTGC GGGTCGGCCC GTATACCACC AAACAACAGC TCAATAATGC TTGGCGAACG CTCTTTCTAG AGACTGACCT GCGGCCAGCC CGCATCCTAA AATTGGTGCA ACCCTAA
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Protein sequence | MAWGERKMCD RVAVQRQLMS VAVMVMGLFM GQSSAMAEDA LSLAEKGVLA SSKGEQEQAL ELFNRALSLG QLDKVGQAVV LSNRGELNLD ENLFEEARKD FIEALKLWPL THKARLGLGQ LAVMQGAWQE GAEQLQRYVD QVTRYRRSEG LLWLHLAQLG MQKGDAAALF KGDQAAQQRT PWQQKIMDFH LGKLEAAKLL QEVQGHRAQA AYHVAVVAQI KGDWAAAKQN YVVAAKDSTG GRYGAAARQQ LVLVESQLAQ QPTTEQPAAA VKAAAEQAAA EQAAAEQAAA EQAAAEQAVA EKVAAEQAAA EKVAAEQAAA EQAVAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEKAAA EQAAAEKAAA EQAAAEKAAA EKAAAEQAAA EKAAAEQAAA EKAAAEQAAA EQAAAEQAAA EQAAAEKAAA EKAAAEKAAA EKAAAEKAAA EQAAAEQAAA EKAAAEQAAA EQAAAEQAAA EKAAAEQAAA EKAAAEQAAA EQAAAEQAAA EKAAAEQAAA EQAAAEKAAA EQAAAEKAAA EQAAAEKAAA EKAAAEQAAA EQAAAEQVAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQVAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEKAAA EKAAAEKAAA EKAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EQAAAEQAAA EKAAAEKAAA EKAAAEQAAA EKAAAEQAAA EQAAAEKAGS AGALPPESKL EKGMVPPKQK TIAEVYMGGS GEKQALLEPA SPQALSDRAN GEELYAPQPA MQQQSGAPLT NQAARSEQTA SSPTEPVPTA TEITTETATE NERLKQVILN APVLDLPQPV LEPKSIPAQP ATEDKQPIPP AASSPATSTP PKQVEPTQNP VTVPALPQPD EVQSKNYNNV YVIDLGSYSN MQWYEENLQQ VKEARLRYYV HTISHDNTRY KRLRVGPYTT KQQLNNAWRT LFLETDLRPA RILKLVQP
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