Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2158 |
Symbol | |
ID | 4483969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2651565 |
End bp | 2653322 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639722902 |
Product | putative glutamate synthase (NADPH) small subunit |
Protein accession | YP_866065 |
Protein GI | 117925448 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.625717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.662886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTATGA CGAATCCGTA CTTGGAATCG GTTACCCAAT GGGAGTTTGA TGAGTGCTCC TTTGAAGAGG GTACCGACAA GATTGTTGCT TATGGTGAGG CCAGCGGTTA CTGCCCCACT TATCAGGAGC GTGTACCGCC TTGTACCAGT GCATGTCCCG CAGGTGAGGA TATTCGTGGG TATAACAACA TTGTGCGCGG TGTTTGGGGT TCTGACGATC CCTACGCCAC TGCGTTTCAG CGTTTAACCC GCAAAAATCC TTTTCCTGCT GTCATGGGCC GTGTTTGCCC TGCCCCGTGT CAGGGTGGGT GCAACCGTCA GTACCGTGAT GAGACCATTG GCATTAATGC TATCGAGCAT GCCATTGGTC AGTATGCCAT CGAAAAAGGG CTGAAGTTTG ACAAGCCTGA AGTCGCCTCT ACCGGCAAGC ATATTGCGGT GGTGGGTGGT GGTGTTGGGG GTCTTTCCAA CGCTTACCAA ATGGTGATGC GTGGGCATAA GGTCACGCTG TTTGATCGTG ACGAGAAGCT GGGCGGTATG CTCCGCTATG GTATTCTTGG TTATCGTGTC TCCCGTGCTG TAATCGATGC GGAAGTTCAG CGTATTTTGG ACTTGGGTGT AGAGGTCAAA TCCGGTGTGA CCATCGGTAA AGACATCACC CTTGAGCAGC TGAGCAAAGA TTATGATGCG GTGTTTTTGG CTGTGGGTGC ACAAAAGGGG CGTACCATTC CCCTGCCCGG CAGCGAAGGC AAAGCTCTTG TGAAGTCTGC CATTGATTTC CTGCGTGATT TTGAAATCAA TGGTGGGATT GAAGCGGGCG GTGCGGACAA GGTTAAGGTT GGTAAAAACG TTGTGGTCAT TGGTGACGGC GACGTGGCCA TGGATGCATG CCGTTTGGCC CTGCGTCTTG GTTCCAAAGC CACCTTACTT TCCGGCGTAG CCCGGGAAGA GATGAACTGC TCGGCTTTTG AGTATGACGA AGCTTTGGCA GAAGGGACCG ACATGAAAAT GTGTACCGGT TCCTTGGAGA TCACGGGTGA AGGTGACACG ATCACGGGCA TTAAAGTGAT CGAGATGGCG CGTAAAGAGA AGGGTGAAGA TGGTTGGAAC CATGCTGTTC CCTTTATGCG TTATAAGCAA AAAGCCGGTT CTGAGGCGAC GGTAGCCTGT GACATGGTGG TTTGGGCTGT GGGTCAAACC ACCGACATGG CCGGTTTTGA GTCTTGCACC AACGGTACCC CTTTCTTACA AGTTGACCAT AACTTCCAAG TGAAGGGTAT GGACAATGTG TTTGGTGGTG GTGACGCTGT GCAGATTCAT CTGCTAACCA CCGCGATTGG TCATGGTCGT AAGGCCGCCG AAGCGATGGA CACCTTCCTT AAGGGTGGCA AGCTGCCTTC CAAGGCGGCA CGCGAGGATG TGGTTAAGTT CGATAAATTG AAGTCTGATT TTTTTGTCGA AAAAGCACAA GCCAAGCGCA AGATTGTTCA CCCTGCCAAC GTGGTTGGCA ATTGGGAAGA GACTTTGCAA CAACTTTCTG CTCAATCCAC CAAGGAAGAG GCCGATCGTT GCATGAGCTG TGGTATGTGC TTTGAGTGTA ACCAGTGCAT GCTCTTCTGC CCCCAGGATG CCATTACCAA GTTTAAGGGT AATGCTGAGG GTGAGGTGAT GTTCACCTAC TACGAGCGTT GTGTTGGTTG TCATATCTGT TCGGAAGTCT GCCCCACCGG TTACATTGAC ATGGGTATGG GCAATTAA
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Protein sequence | MVMTNPYLES VTQWEFDECS FEEGTDKIVA YGEASGYCPT YQERVPPCTS ACPAGEDIRG YNNIVRGVWG SDDPYATAFQ RLTRKNPFPA VMGRVCPAPC QGGCNRQYRD ETIGINAIEH AIGQYAIEKG LKFDKPEVAS TGKHIAVVGG GVGGLSNAYQ MVMRGHKVTL FDRDEKLGGM LRYGILGYRV SRAVIDAEVQ RILDLGVEVK SGVTIGKDIT LEQLSKDYDA VFLAVGAQKG RTIPLPGSEG KALVKSAIDF LRDFEINGGI EAGGADKVKV GKNVVVIGDG DVAMDACRLA LRLGSKATLL SGVAREEMNC SAFEYDEALA EGTDMKMCTG SLEITGEGDT ITGIKVIEMA RKEKGEDGWN HAVPFMRYKQ KAGSEATVAC DMVVWAVGQT TDMAGFESCT NGTPFLQVDH NFQVKGMDNV FGGGDAVQIH LLTTAIGHGR KAAEAMDTFL KGGKLPSKAA REDVVKFDKL KSDFFVEKAQ AKRKIVHPAN VVGNWEETLQ QLSAQSTKEE ADRCMSCGMC FECNQCMLFC PQDAITKFKG NAEGEVMFTY YERCVGCHIC SEVCPTGYID MGMGN
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