| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2153 |
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| Symbol | |
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| ID | 4481418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2644487 |
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| End bp | 2646280 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722897 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_866060 |
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| Protein GI | 117925443 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.453344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TAGGCTGGTT ATTACTCCTT ACCCTCATCC CCATGCACGC TTTTGCAGAT
CATGGCCTGA GCCGCTGGGG AGATTTAAAA TATCCTGCTG ATTTTAAACA TTTTGATTAT
GTCAATCCCA ACGCCCCTGT AGGGGGTGCC CTGACCATGT GGTCCCTGGG CGGTTTTGAT
AAAATGAACC CCTTTACCCT GAAAGGGGAA GCCCCCGACA TGCTGGGCAG TTTGGTCTTT
GAGACCCTTG CCACCAGCGC CTTGGATGAA CCCTTTTCCC AATACGAGCT GTTGGCCAAG
GAAGTTTTTG TGGCAGAGGA TGGTTTGTCT GTCACCTATC GTCTCAACCC TGCTGCAACA
TTTTCGGACG GCTCGGCTGT CACCAGCGCC GATGTGCTCT TCTCTTTGGA GATCTTAAAA
AGCCCCCAGG CCCACCCCCA TTACAGCAGC TATTGGCGGG ATATTGCAAA GGCAGTCGCC
CTGGACGATC ACACCGTGGT CTTTCACTTT TCCCAAAAAA ACCCGGAGTT GCCCTTGATA
ACCGGTCAGT TACCGGTGTT AAGCAAAAAC TTTTTCACCC AACACCCCTT TGGTGAAGCG
TCTTTAACCC CTCCGGTCGG TTCCGGCCCC TATGTGGTGG ATCGTGTGGA TGCCGGCAAA
ACCATCACCT ACAAACGCAA CCCCAACTAT TGGGGTTGGC AGCTGCCCAC CCAAAAGGGC
CTGTATAATT TTGAAAAAGT AGTGATCAAA TATTTTAAGG ATGCCACCGT CGCCCTAGAA
GCCTTTAAGG CGGGGGAGTT TGATTTTGTG CATGTCTACC ACTCCAAACA GTGGGCCAGG
GACTATGTGG GCGCTGCCTT TGACCAAGGC AAAATCATAA AAACCACCCT ACCCCACCAA
AATGTGCAAG GTATGCAAGG GTTTGTTCTT AACCTGCGAC GTCCTATGTT CCAGGACATT
CGGGTTCGCC AAGCGCTCTC GTTGGCCTTT GATTTTGAGT GGAGCAACAA AAATCTGTTT
TATGATCAAT ACACCCGCAC AGCCAGCTAT TTTGATAACT CCGAGCTGGC CGCCAAAGAT
CGACCCTCCC CAGCCGAATT AGCCCTGCTC ACCCCATGGA AAGCCGAACT GCCTGCTTCG
GTATTCGGCC CTGCCGTGGA GCCACCCACC ACGTCGGGAC CAGAAGGATT GCGCGGCAAT
TTGCGCCAAG CCATGCAAAA ACTCAAAGAG GCGGGCTGGG CATTGAACCC CCAGCGCCAA
CTGGTTAAAG ATGGTCAGCC CTTTGTCATC GACATGGTGC TGGTTCAAGC GAGTTTTGAG
CGGATTATGG CCCCCATGGT GGCCAACTTG CAAAAACTGG GCATCACCCT AAACTATCGC
ACCGTGGATG CCTCGCTCTA CACCCGCCGC ATACGCAGTT TTGACTTTGA TATGGTGGTC
TCTTCGTTTG GCCAATCCCT CTCACCGGGC AATGAGCAAT ATGGCTATTG GCACAGTCAA
AGCGCCGACC AAGAGGGCAG CAATAACCTG CTTGGCCTGA AAAACCCTGC TGTGGATGCG
CTGGTGGATG CGATTACCTA CGCCAAAAGC CGGGAAGAGC TGCTCACCGC CACCCACGCA
TTGGACCGCG TCTTGAGGGC CGGTTATTAT GTGATCCCCA ACTGGCACAT ACCCTACCAT
AGGCTTGCTT ATTACAACTA TTTTGAGCAC CCAGCCACCC TGCCCCTCTA CTATCAACCC
TCCAGTTGGG TCATGAGTTG GTGGGTAAAA CCCGGCGCCC AGCATCAGGA GTAG
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| Protein sequence | MKKIGWLLLL TLIPMHAFAD HGLSRWGDLK YPADFKHFDY VNPNAPVGGA LTMWSLGGFD
KMNPFTLKGE APDMLGSLVF ETLATSALDE PFSQYELLAK EVFVAEDGLS VTYRLNPAAT
FSDGSAVTSA DVLFSLEILK SPQAHPHYSS YWRDIAKAVA LDDHTVVFHF SQKNPELPLI
TGQLPVLSKN FFTQHPFGEA SLTPPVGSGP YVVDRVDAGK TITYKRNPNY WGWQLPTQKG
LYNFEKVVIK YFKDATVALE AFKAGEFDFV HVYHSKQWAR DYVGAAFDQG KIIKTTLPHQ
NVQGMQGFVL NLRRPMFQDI RVRQALSLAF DFEWSNKNLF YDQYTRTASY FDNSELAAKD
RPSPAELALL TPWKAELPAS VFGPAVEPPT TSGPEGLRGN LRQAMQKLKE AGWALNPQRQ
LVKDGQPFVI DMVLVQASFE RIMAPMVANL QKLGITLNYR TVDASLYTRR IRSFDFDMVV
SSFGQSLSPG NEQYGYWHSQ SADQEGSNNL LGLKNPAVDA LVDAITYAKS REELLTATHA
LDRVLRAGYY VIPNWHIPYH RLAYYNYFEH PATLPLYYQP SSWVMSWWVK PGAQHQE
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