Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2137 |
Symbol | |
ID | 4481402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2621244 |
End bp | 2622530 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639722881 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_866044 |
Protein GI | 117925427 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0123809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.887659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTTA TACTCCTCTT TCTTGGTTTG ATCTTTTTGT TGCTAATCGG GGTGCCCATT GCCATCAGCC TGGGGTTATC CAGCCTGCTG TTTGTTTTGT TTGCCGGCGA AGATCCCTCC ATGGCGATTA CCGTTGCGCA AAAGCTCTTT AGTACCATGG AGCACACCAC CTTATTGGCG ATTCCGTTTT TTATTCTCTC GTCACACTTT CTCACCACGG GCGGGGTTTC GCGCCGTTTG ATTGAGTTTG CCAAAGCGCT GGTGGGTTGG ATGACCGGTG GTCTGGCCAT GGCGGGGGTG GTCTCTTGCA TGTTGTTTGC GGCGATTTCG GGCTCTTCTC CGGCCACGGT GGTTGCCATT GGCTCAATCA TGATACCGGG CATGATCTCG GCTGGGTATG ACAAACGCTT TGCGGTGGGG GTGATCGCCA CCTCGGGCTC GTTAGGCATT TTGATCCCGC CCTCGATCCC TATGATTGTC TATGCCGATG CGGTGGAAGA GTCGGTGGGG AAAATGTTTA TCGCGGGTAT TTTGCCGGGT CTATTGATGG GCTCTATGTT GCTGCTGGCC ACGTGGGTTG CGGCCAAACG TATGAACATG CCCAAAGAGC CTTGGCAGGG ATTTTCCCAC CTGATCAAGA CGTTTTTAAA AGCGTTTTGG GGCTTGTTGC TGATCGGTAT TGTGGTTGGT GGCATTTATG GAGGGATCTT TACCCCCACC GAAGCGGCCG CTGTGGCGGC GGTCTATTCC GCCTTTATCG CGCTGTTTGT GCACCATGAT ATGGGGTTCA AGGAGATCCC CAAGGTGATG TTGGATTCTG CCAAGATGAC CGCCATGTTG ATGTTCATCA TCGCCTGTGC CATGATCTTT GCCCATGTGT TGACCGAGGA GCGCATTCCC CAAGAACTGG CGGCCCAGGT GATGGCGAAT AATCCATCGC CTTACATGTT TTTGCTGTTG GTGAATGTGA TCCTATGGTT TGCCGGTGAT TTTATGGAAC CCTCGGCGAT TTTGCTTATT CTATCGCCGC TGTTCCATCC CATCGCTGTG AGTTTGGGTA TTGATCCGAT CCATCTAGGT ATTATCATGA CCACCAATAT GGAGGTGGGT ATGATCACCC CACCGGTGGG GCTTAATCTC TATGTGGCGG CAGGTTTGTC GGGTATGAGT TTGGGGGCTG TCACACGCGC GGCGATGCCG TGGATGTTTG TGCTGATTGC CGCCTTGGTG GTCATTACCT ATGTGCCATG GTTGAGTTTG GTGTTGGTCA ATCTGCTTTA CGGTTGA
|
Protein sequence | MTVILLFLGL IFLLLIGVPI AISLGLSSLL FVLFAGEDPS MAITVAQKLF STMEHTTLLA IPFFILSSHF LTTGGVSRRL IEFAKALVGW MTGGLAMAGV VSCMLFAAIS GSSPATVVAI GSIMIPGMIS AGYDKRFAVG VIATSGSLGI LIPPSIPMIV YADAVEESVG KMFIAGILPG LLMGSMLLLA TWVAAKRMNM PKEPWQGFSH LIKTFLKAFW GLLLIGIVVG GIYGGIFTPT EAAAVAAVYS AFIALFVHHD MGFKEIPKVM LDSAKMTAML MFIIACAMIF AHVLTEERIP QELAAQVMAN NPSPYMFLLL VNVILWFAGD FMEPSAILLI LSPLFHPIAV SLGIDPIHLG IIMTTNMEVG MITPPVGLNL YVAAGLSGMS LGAVTRAAMP WMFVLIAALV VITYVPWLSL VLVNLLYG
|
| |