Gene Mmc1_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2106 
Symbol 
ID4481335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2577490 
End bp2578755 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content60% 
IMG OID639722850 
ProductDNA-directed DNA polymerase 
Protein accessionYP_866013 
Protein GI117925396 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATG CGCTGGTGGA TTGCAACAAT TTTTATGCCT CCTGCGAGCG CCTTTTTCAA 
CCGCACCTGG AGGGCAAGCC GGTCGTTGTG CTCTCCAATA ACGATGGCTG CGCCATCGCC
CGCTCCAACG AAGCCAAACA GCTGGGCATT GCCATGGGGG CCCCCCTGCA TCAGATCCAG
GCACTCATCA AGCAGCACCA AGTGGCGCTC TTCTCCTCCA ACTATCCCCT CTATGGGGAT
CTCTCCGCCC GCGTCATGCG CACCCTGGAA CAGTTGGCAC CGCGCGTTGA AATCTACTCC
ATTGACGAAG CCTTTTTAGA TCTCCAAGGC ATGCCTGCGC CCCAACGCCA AATCCTCGGC
AGAACGATCC ATCAACAGGT TAAACGCTGG ACGGGTATCC CTGTTTCGGT GGGCATTGGC
CCCACCAAAA CCCTGGCTAA AGTGGCCAAC CGTTTCGCCA AAAAATCGCC CAAGACCGAG
GGTGTACTGG ACCTTAGCGA CCCCCAATGG TGCCGCAAGG CGCTACACCA GCTCCCCGTT
GGCGAGGTGT GGGGGGTGGG GCCGCGCTGG GCCAAACGGC TTAACCAAGC AGGTATTGAT
ACCGCCCTAC AGCTTAGCCG CATGCCCCCA CCCTTGGCAC GCCAACAGTT TAATGTGGTG
CTGGAACGCA CCGTGCGAGA GCTGCGTGGT GAATCGGTTA TCCCCTTTGC GGCGCTGCCT
GCCGCCCGTC AATCCATCGC CACCACCCGC ACCTTTGGTC AAAAAATCCA TACGCATGAC
GAAATTAAAG AGGCGATCTC CAGCTTTACC GTACGCGCCG CTGAAAAATT GCGGAAGCAG
GGGTTGCTGG CCGCCGCCCT GCACCTGTTT ATCACCACCA ACCGTTTTAG CGAGCAGGAC
CTCCAGTATA AAAACAGCCT CACCTGGAGC TTCCAACAAC CCCAGGATGA CACCCTAACC
CTGCTGACCG GGGCACACGC CGCGCTGGAT GCCATCTACC GGCCCGGCTA CCGCTACCAA
AAGGCCGGGG TGATCCTGTT GGGGCTGGTT TCGGCCCAGC ATTTTCAACC TTCCCTGTTT
GCGCCCCCAC CCAGGCTGCC CAACAGTCGC GCCCTGATGC GCACCCTCGA CGGCCTTAAC
CAAAAGATGG GGCGCGGTAC CGTGCGTTTT GGTGCCGAAG GCCCCCCCAA GCCCTCCTGG
GGCATGCGCC AGTTGCAGAG ATCTCCCGCC TACACCACCC GCTGGAGCGA TCTACCCCAA
GTTTAG
 
Protein sequence
MSYALVDCNN FYASCERLFQ PHLEGKPVVV LSNNDGCAIA RSNEAKQLGI AMGAPLHQIQ 
ALIKQHQVAL FSSNYPLYGD LSARVMRTLE QLAPRVEIYS IDEAFLDLQG MPAPQRQILG
RTIHQQVKRW TGIPVSVGIG PTKTLAKVAN RFAKKSPKTE GVLDLSDPQW CRKALHQLPV
GEVWGVGPRW AKRLNQAGID TALQLSRMPP PLARQQFNVV LERTVRELRG ESVIPFAALP
AARQSIATTR TFGQKIHTHD EIKEAISSFT VRAAEKLRKQ GLLAAALHLF ITTNRFSEQD
LQYKNSLTWS FQQPQDDTLT LLTGAHAALD AIYRPGYRYQ KAGVILLGLV SAQHFQPSLF
APPPRLPNSR ALMRTLDGLN QKMGRGTVRF GAEGPPKPSW GMRQLQRSPA YTTRWSDLPQ
V