Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2104 |
Symbol | |
ID | 4481333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2575593 |
End bp | 2576396 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639722848 |
Product | hypothetical protein |
Protein accession | YP_866011 |
Protein GI | 117925394 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.399014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTC TCCCCATCAC CCCTTGGGAA CTCAGCCTCG CGGCACTGCT GGTATTGGCC ATGGCCGCAA CCAGCATCGC CTTACAGCTA AACCTGGGCA AGCGCATTCT TATGGCCGCA ACCCGCACCG TTATTCAGCT TACCCTGTTG GGATTGGTGC TCAAGACCTT GTTTGCCCAA ACCCATTGGG GCTGGGTCGC GCTGATGGGG AGCGTCATGC TCTTGGCCGC CGGACGCGAG GCCACCCAGC GGCAATCCCG CCGTTTTAGC GGGTGGTGGA GCTTTGGTAT TGGTCTCTCT GCCATGTTTG TCTCCTCCTT TGTCATCACG CTGCTGGTGT TGTGGACGGT TCTCACCCCC ACCCCTTGGT ATCATCCTCA ATATGCCATT CCGCTGTTGG GCATGACCCT GGGCAATACT TTAAACGGCA TTGCCCTGGG GTTGGAACGT CTCACCCAGG GCGCTTGGCA GCAGCGCATG ATGATTGAAA CCCGGTTAGC CTCTGGCGAG CCTTGGCCTC AAGCGCTTAT CCAGATCAAA CGCGAGGCGG TGCGCACCGG GACCATCCCC ATGCTTAACG CCATGGCGGC GGCGGGCATT GTCAGTCTGC CCGGCATGAT GACCGGTCAA ATTTTAGCCG GTGCCGACCC TATCCAGGCG GTTAACTATC AAATTTTGAT TATGTTCATG GTTAGCTCTG GAGCTGGTTT TGGTACCATG CTGGCGGTGC ATTTGGGGGC CAGACGGCTA TTTGATGAGC GTCACCGCCT GCGCCTAGAT CGTCTGCGCC CGGGCAAGGC GTAG
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Protein sequence | MNALPITPWE LSLAALLVLA MAATSIALQL NLGKRILMAA TRTVIQLTLL GLVLKTLFAQ THWGWVALMG SVMLLAAGRE ATQRQSRRFS GWWSFGIGLS AMFVSSFVIT LLVLWTVLTP TPWYHPQYAI PLLGMTLGNT LNGIALGLER LTQGAWQQRM MIETRLASGE PWPQALIQIK REAVRTGTIP MLNAMAAAGI VSLPGMMTGQ ILAGADPIQA VNYQILIMFM VSSGAGFGTM LAVHLGARRL FDERHRLRLD RLRPGKA
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