Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2103 |
Symbol | |
ID | 4481332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2574955 |
End bp | 2575596 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639722847 |
Product | ABC transporter related |
Protein accession | YP_866010 |
Protein GI | 117925393 |
COG category | [R] General function prediction only |
COG ID | [COG4619] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.71434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACA CACAAACATT GGAGATAGAT CCCCAAGCGG GACTCTCCCT GAGCGGCTTT ATCCTGCCTG ACGGGCACGC CTTGGCGCTG CGTCTTGCGC CGGGCACATG CTGTGCCATT ATGGGTCCTT CGGGCAGTGG CAAATCCTTG TTGCTCCGCG CCATTTGTGA TCTGGACCCT CACACGGCCC AGGTGCAGTG GCAAGGAGCA TGGCAGCAGC AGACCCCTGC CCCCCAATGG CGTAGCCGCG TGGCCTACCT ACCCGCTGAG AGCGCTTGGT GGCATGATCG CGTGGGTGAG CACTTTACCG ATTCTGACGC AGCCATCCCC CTGCTTCAGG CGCTGCACTT GGAACCGGCC TGTTTATCCT GGTCCATGCA CCGTACCTCC AGCGGCGAAC GGCAACGCAT GGCCATTGCT CGTCTGCTGG CCCGCCAACC TCAACTGTTG CTGTTGGACG AACCCACCGC CAATCTGGAT GCCACCCGTA CCCAGTTGGT TGAGCAGCTA TTCAACCGCT ATCGAACCCA CCACCAGACC ACGCTGTTAT GGATCACCCA TGATCTGGCT CAGGCCAAAC GGGTTGCCAC CCAGATCATT GAACTGACCC CTGGCCACGG TTTTCGTGAG GTGCAACCAT GA
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Protein sequence | MNHTQTLEID PQAGLSLSGF ILPDGHALAL RLAPGTCCAI MGPSGSGKSL LLRAICDLDP HTAQVQWQGA WQQQTPAPQW RSRVAYLPAE SAWWHDRVGE HFTDSDAAIP LLQALHLEPA CLSWSMHRTS SGERQRMAIA RLLARQPQLL LLDEPTANLD ATRTQLVEQL FNRYRTHHQT TLLWITHDLA QAKRVATQII ELTPGHGFRE VQP
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