| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2102 |
|---|
| Symbol | cysM |
|---|
| ID | 4481331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2573962 |
|---|
| End bp | 2574852 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639722846 |
|---|
| Product | cysteine synthase B |
|---|
| Protein accession | YP_866009 |
|---|
| Protein GI | 117925392 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.701081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCT TGGAATCATT GATCGGCAAC ACACCTTTGG TAGATCTTGA TCGTGTGGTC
AAGGGGTGTG TCGAGGGGGT TAAGCTGTTG GCTAAGGTGG AGGGTAATAA TCCGGGGGGG
TCGGTCAAGG ATCGTGCCGC CTATGGCATG TTCATGGGGG CGGAGCAGCG GGGTGTGCTC
AACCGGGAGA CCCGTATTTT TGAGGCCACC AGTGGCAATA CCGGCATCGC CTTGGCGATG
ATGGCGGCAC GTCGCGGGTA CCAGCTTACC TTGGTCATGC CCGAGACGAT GACCCTGGAG
CGCCGCGCCA CCATGGCGGC TTATGGTGCG GATTTTCTGC TGGTCACGGC GGAGCAGGGT
ATGGAGGGGG CCATTGATCT GGTTAATGCC AAGGTCGCCA ATGGCGAGGG GATTAAGCTG
GACCAATTTT CCAATGCGGA TAATTGGGGT GCCCACTACC GCACCACGGG TCCGGAAATC
TGGCGCGATA CCCAGGGGCA GATTACCCAT TTTGTGAGCG CCATGGGGAC CACAGGGACC
ATCATGGGGG TTTCGCGGGC CTTAAAAGAG CGTAACCCGC AAATTCAGAT TATCGGTGTG
CAGCCAGATG AGGGGTCGCA AATTGCGGGC ATTCGTCGCT GGCCACAAGC CTATATGCCA
AAAATCTTTG AGCCATCCCG GGTGGATACC ATTTTGGACG TCAACACCGC CGAAGCGCGA
GAGATGACCC GCCGTTTGGC GCGGGATGAA GGGCTTTTTT GCGGCCTCTC AGCGGGTGGG
GCGGTGGCGG CGGCGCTCAA GGTTTGCCAG GGGTTAAGCC AGCCCGGCAC GGTGGTGGTG
ATTATTCCAG ATCGGGGGGA TCGCTACCTT TCGACCGATC TGTTTCTCTG A
|
|---|
| Protein sequence | MATLESLIGN TPLVDLDRVV KGCVEGVKLL AKVEGNNPGG SVKDRAAYGM FMGAEQRGVL
NRETRIFEAT SGNTGIALAM MAARRGYQLT LVMPETMTLE RRATMAAYGA DFLLVTAEQG
MEGAIDLVNA KVANGEGIKL DQFSNADNWG AHYRTTGPEI WRDTQGQITH FVSAMGTTGT
IMGVSRALKE RNPQIQIIGV QPDEGSQIAG IRRWPQAYMP KIFEPSRVDT ILDVNTAEAR
EMTRRLARDE GLFCGLSAGG AVAAALKVCQ GLSQPGTVVV IIPDRGDRYL STDLFL
|
|---|
| |