Gene Mmc1_2071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2071 
Symbol 
ID4481457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2546372 
End bp2547148 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content56% 
IMG OID639722814 
Producthypothetical protein 
Protein accessionYP_865978 
Protein GI117925361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.554507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0695773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGT TGGATTTTAA CCACAATGGA GGAGAGTTCG CCTCTGCCAT CAATCACCTG 
ATCGATGTCG CTCTGGAAGA GGAAAACCAC CAACAGACAC CTCGCACCTA CCTGGGCGCA
TCCCGTTTAG GAGTGGCTTG TGAACGGGCG CTGCAGTTTG AGTACGCCCG TGCCCCCAAG
GATATGGGGA AGGATTTCGA TGGACAGCTC CTGCGCATTT TCGCCGCTGG ACACCTGTTT
GAGGATATGG CGATCCGCTG GATGCGCATG GCTGGGTTTG AGCTTTTCAC CACCAAGGGT
AATCGCCCTA ATGGCGAGCA GTTCGGCTTC GAAGCCGCTG GCGGTCGGAT TCAGGGCCAT
GTAGATGGGA TCATCGTATC TGGCCCAAAC AGCATCACCA TGGGTTACCC CTGTCTATGG
GAGTGCAAGT CCCTCAACAA TAAATCCTGG AATGACACCG TAAAGCGCGG GGTGGCCCTC
TCCAAGCCGG TATACGCAGC CCAGGTCGCC ATCTATCAGG CATATATGGA GCCCCAGGTA
GGGGGCATCT CGGCCAACCC GGCGCTGTTC ACCGCCATCA ACAAGGATAC GTCTGAAATC
CATCACGAAC TGGTGCCTTT TGATGCCCCA CTGGCCCAAA GGATGTCCGA CCGGGCGGTG
CGGATCATCA AAGCCACAGA GGCCCATGAG CTACTACCCC GGATCAGCCG GGAATCGACA
CACTTCCAGT GCCGTATGTG TAGCTGGGCA GATCGCTGCT GGAGTCTATC AGCATGA
 
Protein sequence
MTMLDFNHNG GEFASAINHL IDVALEEENH QQTPRTYLGA SRLGVACERA LQFEYARAPK 
DMGKDFDGQL LRIFAAGHLF EDMAIRWMRM AGFELFTTKG NRPNGEQFGF EAAGGRIQGH
VDGIIVSGPN SITMGYPCLW ECKSLNNKSW NDTVKRGVAL SKPVYAAQVA IYQAYMEPQV
GGISANPALF TAINKDTSEI HHELVPFDAP LAQRMSDRAV RIIKATEAHE LLPRISREST
HFQCRMCSWA DRCWSLSA