| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2070 |
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| Symbol | |
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| ID | 4481456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2544225 |
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| End bp | 2546375 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639722813 |
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| Product | TOPRIM domain-containing protein |
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| Protein accession | YP_865977 |
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| Protein GI | 117925360 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0458393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATG GGGCTCCATA TCTCGATTTC AATGATGCGG GTGGACAGCA GGAGTTTTCT
TCTGTTGCAG AACAGCATCA TGAAAAGGAG GAGATCAAAG CACGTTTGCA GAGCCAGATT
GAGTCGGTGC TGTATCACCT TTTGCCTGCC GGGAAGGTTC GTCATGGGCA GTTCTTCATC
GGAGATGTGG AGGGCAACCC CGGTGAGAGC ATGAAGGTTG AGCTGACGGG AGAAAAGGCC
GGGGTCTGGT ATGACCATGC TGCGGGTTCG GGTGGCGACA TCCTGGACCT GTGGGCCCGG
TCACGAGGCA TGGACACCCG CACCCAGTTC CGTGACGTCA TGGATGATGT GCGCGACTGG
CTGGGAGAGT CCGTGAGATT GCCACCTGCA CCGATGCAGT CCACCCCACG GCGTGAACCC
CCCATGGATG AGTTGGGGCC CCATACCGGT AAGTGGGACT ATTTCGATAC CAATGGCCAA
CTACTGGTCT GTGTCTACCG TTACGATCCT CCGGGCCGCC GAAAGGAGTT TCGGCCCCTG
GATGTGCGCA CCGGCAAGTG GCAGTCGCCA GCGGTGACGC CCCTCTACAA CCTACCTGGA
ATCATGCAAG CCGCTGAGGT GGTGCTGGTC GAAGGGGAAA AGAGCGCCCA GGCGCTCATC
GATGCGGGAA TCCCGGCGAC CACATCTCTA GGCTCCAAAG GGCAGATCAA CCGCGCTGAT
TGGAGCATTC TCCAGGGTAA ACGGGTAATC ATCTGGCCCG ACCGGGATAA GGCAGGATGG
GAGTACGCCC AGTTGGCATC ACAAGCCGTT AAGGGTGCTG GAGCCCATGA AGTGTCCATT
CTCACACCGC CAGAGGGAAA ACCTGAAAAA TGGGATGCTG CTGATGCCGT GGCCGAAGGG
ATGGATGTGC GTGCGTTTCT CCAAAATGCA GCCCAGCAAG CACCCCAAGT CAAGCAACGC
CGTCTTCGGC TAAAGGATTG GACCTTTGCC CGTTTTCAAG GGCCTGCTCC GGAACGCCAG
TGGCTCATAG ACGGGGTTTT ACCAATGAAG GTACCAGGGA TGGTGGCTGC TATTGGTGGG
GCAGGTAAAA GCATGCTGCT GCTGGATCTC TGCATCAAAG TGGCCCAGAT CCAAACGGGG
ACGCCTATCC CCACAGATGC TTTGGGTGGT CCTCTTATCC CTGTCGCTGG CACCGCTGTG
ATGCTCACCG CAGAGGATGA TCAAGATGAG ATTCACCGTC GACTTAACCA CTTGGTGGCC
GACCTACCTG ATCCTGACCG ATTGATCGTT CTTCCCCTGC CTAATGCCGG GGGGGCTATG
CCTCTCGTTG CCATGGGGCG TGAAGGTCCA GTGCTTACTG AAGCCTATGA GGAGATACGG
CAGGAATTGT TGGCAATACC AGATTTGCGT CTGGTCGTTA TCGACCCTCT CCAGAGTTTT
GCCGGTGGTG ATGTCAACAG TGACCCCGCA GCGGGGGCCA TGTTCTTTGC TGGGTTGGGT
CGTATTGCTG CCGAGACGGG TGCAACCACA TTGGTAGCCC ATCATTTCAA GAAAGTGGGC
AACAGACCCA TCCACAGCGC CAGTGAGGCC AGGGAAGCGA TCCGTGGCAC CACCGCCCTT
GTTGATGGCG GGCGCTGGTC CTACGCCTTT TGGGAGGTGG ATGCTGAGGA GTCCAAAAAA
ATCTGCAAAA AACTCAATCG ACGCTATGAA CGGGACTGTG TGTTTAAGGG GGCAGTCGTC
AAGAGCAACT GGCCAACCGA TAAAGCGGTC CGGATCTATG TTCGTGAGCC TTCAACCGGG
CTTTTAGTCG ATCGTTCATT CGATCTCAAT ATGCTTCAAA AAAATACGGA TGATGATCAC
CTTAAACAAC TGGCGACAGC TATAGCTTTC GCAGCCTCCA ATGGTCAGCC GTTTACCAAA
AGTGGCGGTA GTGGGCTGTA CGATCGCCGC GCGGAACTCC CTGGTGAATT GAAGCAATTC
TCGAAACACA AAATGGCCGA AGCCATTGAT GCCCTGCTCG ACTCCGGGAA GGTAGTCCAG
TGTATGGGGC CAAGTAGCCA CATCAAGAAA TGGTTAGATA TCCCTGGGGG TGAATTTGCT
CTCGGAGTTG GTCAATTTCA ACTCGGCTCT GGATCATCTG AGGAGGCCTG A
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| Protein sequence | MNNGAPYLDF NDAGGQQEFS SVAEQHHEKE EIKARLQSQI ESVLYHLLPA GKVRHGQFFI
GDVEGNPGES MKVELTGEKA GVWYDHAAGS GGDILDLWAR SRGMDTRTQF RDVMDDVRDW
LGESVRLPPA PMQSTPRREP PMDELGPHTG KWDYFDTNGQ LLVCVYRYDP PGRRKEFRPL
DVRTGKWQSP AVTPLYNLPG IMQAAEVVLV EGEKSAQALI DAGIPATTSL GSKGQINRAD
WSILQGKRVI IWPDRDKAGW EYAQLASQAV KGAGAHEVSI LTPPEGKPEK WDAADAVAEG
MDVRAFLQNA AQQAPQVKQR RLRLKDWTFA RFQGPAPERQ WLIDGVLPMK VPGMVAAIGG
AGKSMLLLDL CIKVAQIQTG TPIPTDALGG PLIPVAGTAV MLTAEDDQDE IHRRLNHLVA
DLPDPDRLIV LPLPNAGGAM PLVAMGREGP VLTEAYEEIR QELLAIPDLR LVVIDPLQSF
AGGDVNSDPA AGAMFFAGLG RIAAETGATT LVAHHFKKVG NRPIHSASEA REAIRGTTAL
VDGGRWSYAF WEVDAEESKK ICKKLNRRYE RDCVFKGAVV KSNWPTDKAV RIYVREPSTG
LLVDRSFDLN MLQKNTDDDH LKQLATAIAF AASNGQPFTK SGGSGLYDRR AELPGELKQF
SKHKMAEAID ALLDSGKVVQ CMGPSSHIKK WLDIPGGEFA LGVGQFQLGS GSSEEA
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