Gene Mmc1_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2065 
Symbol 
ID4481328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2541281 
End bp2542012 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID639722808 
Productdeoxyribonuclease I 
Protein accessionYP_865972 
Protein GI117925355 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.014094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0314213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAC CTGGATTTAT AGTTTTGACA CTCTCACTGC TGATGACCAT CTCGGCCATC 
GCCCAAGCTG CTGATCCTCA AATCCCCCAT CGCATTGCTT CGTTCAGCGA AGCTAAAAAG
CTTCTCCCCA AAGTCTTTGA AGGCCACCGC ACTACATTTT ACTGCGGCTG TAGCTATACC
AAGCATAAGG AAGTTCGGTC GGGAGCATGC GGCTATCAGC CCCGAAAAAA TCCTAAGCGG
GGTAGTCGCA TTGAATGGGA ACACGTTGTT CCTGCTCACG CCTTTGGCCA TACCCGTCAG
TGCTGGCAAG AGCCAATCTG TACAACCCAA AAAGGCAAAG CTTACAAAGG CCGCAGATGC
TGTGCGAAGG TTGATCCCGT CTTTGAAGCG ATGGAGTCTG ATCTCCACAA CTTGGTCCCT
GCAGTAGGTG AACTTAACGG CGATCGCAGC AACCTGTCAT TTTCTATGGT TTCAGGTGAG
CCCAGAGCTT ATGGAGCCTG TGATTTTGAG ATCGACTGGG ACACCGACCG TGTTGAGCCC
CGCCCTGAAG TGCGTGGTGA TATTGCTCGG ACCTATTTCT ACATGAATGC CACATACGGT
TTGCCAATCA GCAAAAAGCA GAGGCGGCTC TTTGAAGTTT GGAACAGGGA AGATCCAGTC
GATGACTGGG AACGTGAACG GAATCGTAGA ATAGAACGGA TGCAGGGTAA CGCAAATCCC
TTTATCCAGT AG
 
Protein sequence
MGKPGFIVLT LSLLMTISAI AQAADPQIPH RIASFSEAKK LLPKVFEGHR TTFYCGCSYT 
KHKEVRSGAC GYQPRKNPKR GSRIEWEHVV PAHAFGHTRQ CWQEPICTTQ KGKAYKGRRC
CAKVDPVFEA MESDLHNLVP AVGELNGDRS NLSFSMVSGE PRAYGACDFE IDWDTDRVEP
RPEVRGDIAR TYFYMNATYG LPISKKQRRL FEVWNREDPV DDWERERNRR IERMQGNANP
FIQ