Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2053 |
Symbol | |
ID | 4481316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2534572 |
End bp | 2535246 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639722796 |
Product | hypothetical protein |
Protein accession | YP_865960 |
Protein GI | 117925343 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00113901 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0119007 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAACC TCACTCATAC TCAACAGACC ATTCTTAAAG CCGCTGCCCA GCGCCCAGAC GGGTCGATCA ATCCTTTACC AGAACGGATC AAAGGGGGCG CATCGGTAAA GGTGATCAAC GCCTTGGAAG CCAAAGGCTT GATCGAGAAC GTAAGCATCA ACCCACCCTA CCCCAACTGG GTCCTTACCA GCGCTGCATA CCAGGCTATT GGCCAGGAGC CTCCTGCCCT ACCTCCCGTC GAGAACCAGA TCATCGACAC CATGACTGAG GAAACAGATA CCCCGGAAGA TCTCAAGCCT GGAATCTTCA GCAGGATTGC CCTGGATTAC CTTTTCATCG ACACGCTGGA AACCCGCAAA TCCGACAGCC TCGACTTCCA CAACGTCAGC GTCTGGGGCG TCCAGAGCGC TTTGGAAGCC GCCTTCCAGG CTGGGGTTGA AGCAGCACAA CGCAAAACGT CCCAATCCAG AGGGACCAGG GCGAACTCGA AACAGGCCAG AATAATTGAG ATGATGCAGC GGCCTGGCGG AGCCACATTG GAGCAAATCG CCGCCGAGAC GGGATGGAAT AAAAGTACGA TCAGGGGCGC GATCTCCGGC ACCCTGAAGA AGAAGTTGGG CCTTGATGTC AGCCGCGACA AGGTCGATGG GGGGACCACC TACCATATTG GCTGA
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Protein sequence | MINLTHTQQT ILKAAAQRPD GSINPLPERI KGGASVKVIN ALEAKGLIEN VSINPPYPNW VLTSAAYQAI GQEPPALPPV ENQIIDTMTE ETDTPEDLKP GIFSRIALDY LFIDTLETRK SDSLDFHNVS VWGVQSALEA AFQAGVEAAQ RKTSQSRGTR ANSKQARIIE MMQRPGGATL EQIAAETGWN KSTIRGAISG TLKKKLGLDV SRDKVDGGTT YHIG
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