Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2016 |
Symbol | |
ID | 4480940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2500120 |
End bp | 2502966 |
Gene Length | 2847 bp |
Protein Length | 948 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639722759 |
Product | helicase domain-containing protein |
Protein accession | YP_865923 |
Protein GI | 117925306 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.302427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCG CCCAGGAAGT GTTTCAACCA GGCAGCCTTG TCCGGGCCCG AGGTCGGGAG TGGGTCGTCC TGCCGGAGAA CCGGGAACAG GTCCTCCGTT TACGACCGCT GGGAGGCAGT GAAGAGGATG CCACCACCAT TTTTCTACCT TTGGAGCCAA CTCCCCCAGT GCCAGCCACC TTTCAACTGC CTGATGCCAC CAAGGCGGGC TCGCAAACGG CGGCTCTGCT GCTGCGGGAC TCTCTCCGCC TCAAGCTGCG CGCCGGTGCG GGACCATTTC GGAGTTTTGG CAATATCGGC GTCGAACCTC GCGCCTATCA GTTGGTGCCG CTGCTCATGG CGCTACGCCT GGAGACGGTG CGGCTGCTCA TCGCCGACGA TGTGGGGGTT GGCAAAACCA TTGAGGCTGG CCTGATCGTC CGGGAGCTGT TGGATCGTGG CGAGGTGGAG AGGATGACGG TCATCTGCCC CCCGCACCTG TGCGAACAGT GGCAAGAGGA GTTGGCAGCC AAATTCAACA TCCAGGCCGA GGTAGTGCGA ACTGGGACAG CGGGACGCCT GGAGCGTGGC CTGATGGCCG GCCAGTCCAT CTTCGAGGAG TACCCTTTCA CCATCGTTTC CCTGGACTAC ATCAAAGCCG ACCGTCGCCG GGACGAATTC CTTCGAGCCT GCCCGGAGCT GGTCATCGTC GAAGAGGCCC ACAGCTCTGT CCGTAGTGGT GGCAATACCC GGCACCAGCG CTACCAGCTT CTCAAAGGTC TGGCCGACGA TCCCAACCGG CACATGCTGT TTCTCACCGC CACGCCCCAC AGCGGCGATG AGGAAGCTTT TTACAATCTG CTCGGCCTGC TACGCCCCGA TTTCAAGCAG CTCCAGGGCG TCAACCCTGC CGACCGAAAG GAATTGCGGG AGGATCTGGC CCGCTATTTC GTGCAACGGC GACGTCCGGA TATCCGGGAG TGGCAAGACT CCACGGTGTT CCCGGATAGG GAATCGGCAG AGACCACCTA TGCCCTGACC GGTGACTGGA AGCAACTGTT CGATGATGTC CTCCACTATG CCCGGGAGAT GGTGAAACAA ACCGAAGGCT TGAGCCTCCT GAAACAGCGT ATGAGCTGGT GGGCGGCGCT GGCGCTGCTT CGCTGTATCA GCAGTAGTCC GGCAGCGGCC GCCATGGCGC TTCGTACTCG CTTGGAATCC ACCGAGGAGG AGTCGGAGGA GAGTCAGATC GCACTGTTGG AGAAGCAGGC GTCCGAAACG GTTCTGGATG GCGACTCCGA AGAGACCCTC AATCAGGACG AAAGCGTTCC TGCCGGCACG GTGGAAGATA CCGCCGCGCT CAAGAACCTG ATCAAGCGGG TGGACAAGCT CAAAGGTCCC AAAAACGATC CCAAGCTGGA AGAGTTGATT TCCCAGTTGA AGGATCTCGT GTCCAACGGG TTTCAACCTG TCGTCTTCTG CCGCTACATC GCCACCGCCC ATTATGTGGC GGAGCATCTG CAGAGTGCGC TCAAACGCGC CGGGGTGGAG GTCATGGCCG TCACGGGGGA ACTGACCCCG GAAGAGCGCG AGGAGAAGGT CCATGGCCTC TCCGAGTTTG CCAAGCGCCT GCTGGTGGCC ACCGACTGCC TCAGTGAAGG CATCAACCTG CAAAACCTCT TCAACGCCGT GGTCCATTAC GACCTGACCT GGAATCCCAC CCGCCACGAA CAGCGGGAAG GCCGGGTGGA TCGTTTCGGG CAGCCTTCTC CCAAAGTCCG CGTGCTCATG TACTACGGTG AGAACAACCC GGTGGACGGG GCGGTGTTGC AGGTGATCCT GCGCAAGGCG GAACGCATTC GCAAAGAGCT GGGCGTCACC GTTCCCATGC CGTCGGACAG TAACAAGGTG ATGGACGCCA TTATGCAGAC GGTGCTGCTC AAGGAAGGCA GCCTGGTCCA TGGCCAGCGC CAGTTCTCCC TGGTCTTCGA TGATCTGGAC AACGAAGTGG ACATGGCCTG GGAGAGCGCC AAGGAGAAGG CCAAACAGAG CCAGACCATC TTTGCCCAGC GCCGTCTGAA GCCGGAGGAT GTCCTGCCGG AGTGGGAGAA GGCCATTCAG GTGCTGGGTG GGGAATCGGA CGTTGAGCGC TTTGTAACCC GCACGGCGGA ACGTCTCCGT GCCCCATTGG AGCCGACGAA AAACCATTTT CGGTTCCCGT TGCAGCACAT GGCCCCGCAA CTTCGGGAAC GTCTGGCCGG CGTGGGTCTG GAGGGCGCCA TTCGCATCAC CTTCACCCAT CCCGCCCCTT CGGGGGTGGA ATATGTCCAC CGCGCCCACC CCCTGGTGGC CACCCTGGCG GAGCATGTGG CGGAACGGGC GTTGGAGGAG GAAGAACCGG AACTGGCCGC CCGCTGTGGG GCCATCTTCA CCAGGGAGGT CAAAACCCGC ACCACGGTCT TCCTGCTGCG CCTGCGTAGC CAGTTGATGA TCGAGCGGCG CGAGGGCAAT CGCTTCGTCC CCCACCGGAC GCTGCTTTCC GAGGAGTGCC TGGGCGTGGC GGTGGAGGGT TCCAGCGAAC CTCGGGTGTT GCCGGAAAAG GATGCCCTGG CGTGGAAGAA GCTGGAGTCG GCCCGCAACA TGGAACCAGC GCAGAAAGCA CAGATGATCG AGGCTGCCAA GGCCACTGTG GAAAAACTGC AACTGCCCTT CAGCCAGATC GCCCGCAAAC GGGCCGATCA GCTATTGGCG GACCATCGCC GGGTCCGCGA GGCCAGCGAC GCCAAGGGGG TTCGCTATGA CGTCAAAGCA TGTCTTCCTG TTGATGTCAT TGGCATCTAC GTACTGGCGC CAGCTGTGAC GTTTTAA
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Protein sequence | MSTAQEVFQP GSLVRARGRE WVVLPENREQ VLRLRPLGGS EEDATTIFLP LEPTPPVPAT FQLPDATKAG SQTAALLLRD SLRLKLRAGA GPFRSFGNIG VEPRAYQLVP LLMALRLETV RLLIADDVGV GKTIEAGLIV RELLDRGEVE RMTVICPPHL CEQWQEELAA KFNIQAEVVR TGTAGRLERG LMAGQSIFEE YPFTIVSLDY IKADRRRDEF LRACPELVIV EEAHSSVRSG GNTRHQRYQL LKGLADDPNR HMLFLTATPH SGDEEAFYNL LGLLRPDFKQ LQGVNPADRK ELREDLARYF VQRRRPDIRE WQDSTVFPDR ESAETTYALT GDWKQLFDDV LHYAREMVKQ TEGLSLLKQR MSWWAALALL RCISSSPAAA AMALRTRLES TEEESEESQI ALLEKQASET VLDGDSEETL NQDESVPAGT VEDTAALKNL IKRVDKLKGP KNDPKLEELI SQLKDLVSNG FQPVVFCRYI ATAHYVAEHL QSALKRAGVE VMAVTGELTP EEREEKVHGL SEFAKRLLVA TDCLSEGINL QNLFNAVVHY DLTWNPTRHE QREGRVDRFG QPSPKVRVLM YYGENNPVDG AVLQVILRKA ERIRKELGVT VPMPSDSNKV MDAIMQTVLL KEGSLVHGQR QFSLVFDDLD NEVDMAWESA KEKAKQSQTI FAQRRLKPED VLPEWEKAIQ VLGGESDVER FVTRTAERLR APLEPTKNHF RFPLQHMAPQ LRERLAGVGL EGAIRITFTH PAPSGVEYVH RAHPLVATLA EHVAERALEE EEPELAARCG AIFTREVKTR TTVFLLRLRS QLMIERREGN RFVPHRTLLS EECLGVAVEG SSEPRVLPEK DALAWKKLES ARNMEPAQKA QMIEAAKATV EKLQLPFSQI ARKRADQLLA DHRRVREASD AKGVRYDVKA CLPVDVIGIY VLAPAVTF
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