Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1981 |
Symbol | |
ID | 4481294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2458573 |
End bp | 2460471 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639722725 |
Product | transposase, IS4 family protein |
Protein accession | YP_865889 |
Protein GI | 117925272 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTGTA GTGCCATAAT AAATTATTAT GTCTTGCGCC ACCATGGTGC TTTTGGTATC ATTCCGAGTA TGTATATACG ACGCACACAA ACCCGCAATA CAGCCACAGG CGAATCTTAC TACACGCATC GCCTGGTTCA ATCCCTTCGT GTCGGCACGA AGGTCAGGCA GGTGACACTC TTGAATCTTG GCCGTCATTT CGCCATAGGC CAGAATCACT GGCCCACCTT GTGTTCACGT ATCGATCAAC TGCTAAGCCC TCAGAAGACA CTGATTTCTC TTGATTGTCC TTCGCAAGTG GAGCGGGAGG CCCAGCGTAT TGTCGCGCAA TTGTTGACCC GTCAGCCGGA AGCAATCCCG TCTGCCAAGG AGACGGAAAC CGGCCTTTCC CCAGAGGATG TGCAAACAGT ATTGGTGGAC TCTCTTGAAA TGAGCCGCCC CCGGAGTGTG GGGGTGGAGC AGGTGGGACT ATGGGCCATG GGTAAGGCAG GGTTTACAGA ACTGTTGGCC GATGTCGGAC TAACCGGCCC TCAGCGAGCC GCAGCCATCG GCGCCATTAT TGGACGCATG GCCGCACCTG GTTCCGAACG GGCGCTGCAT AGATGGCTCA GCGCCCAAAG CGGCCTAGGG GAGTTGCTTG ATGTGGACTT CGAGACCATG AGCCTGATGC AATTTTACCG AGTTTCAGAC CTATTGATCA GAAACCGCGA GGCTATCGAA AACAGATTGT TTTCCAAGAT TAACGATCTA TTCAACCTGC CGGGCACCGT CACCTTATAC GATTTGACCA ATACCTATTT TGAGGGAGAG GCAGAAGGAA ACAGCAAAGC TCAGCGGGGG CGCTCAAAGG AGAAGCGTTG CGACTCTCCC CTGTTGACCT TGGGTCTGGT ACTCGACGGT AGCGGGTTTG TGCGCCGTTC GCAGATTTTC CCCGGCAATG TCTCCGAAGG GAGCACCCTG GAAGGGATGC TCAAAGGCTT GAATGCTCCC AATGGTGCCT TGGTGGTTAT GGATCGGGGG GTAGCCACTG AGGCCAATCT TGTCTGGTTA CGCGACAAAG GCTATCGTTA TCTGGTGGTC AGCCGAGAAC GCGAGCGGCA ATTCGATTTC AACGGTGCTG CATGTATCGA AACGGCCGCA AAGGAACAGA TCCACATCCA AAAAGTTCTC AGCGACGATG GCCAGGAGGT GAGGCTTTAC TGTCATTCCC AACGCCGTGC GGAAAAGGAA AAGGGGATCT CCCGGCGTTT TGCCGAGCGC TTTGAAGCCG GTCTGACTAA GCTCTCCGAG GGGCTTTCCA AGCCCCGCAC CACAAAGAAT ATCGATAAAC TTTGGGAGCG CATTGGACGG CTGAAAGAAA AAAATCGTGG TATAGGCCAG CACTACCACA TCGAAATCAT CCCGGACGAC AGTGGTTTGC AGGCCCAAGC CATCCATTGG AAACAAAAAC CGCTCGATGG CACCTCGCTG ACCCACCCTG GGGTCTACTG CCTGCGTAGC AACGAGACCG GCTGGGATGA GGAGCGCTTA TGGCGCACCT ACATCACCCT CACGGATCTG GAATCGGTGT TTCGCTCTCT CAAATCGGAA TTGGGCTTGC GTCCACTCTT CCATCGGAAA GAGGAACGCA GCGATGGTCA TCTGTTTATC ACCGTGCTGA CCTACCAGAT CGTACAGATA ATACGTCAAC AATTGGCGGA AAAAGGTATC CACGGTCGCT GGAGCACGCT GCGAGACATC CTCTCCAGCC AGTGCCGGAT TACCGCTTCA TTTCGACGAC CCGATGGACA TTCCTTGCAG GTGCGCAAAG CCACCAGACC TGAGCCTGAA CAACAGAAAA TCTTCCAGGC GCTTGGAATC CATGCAAACC CAGGCGGGGT GAAAAAGATG GTCGTCTGA
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Protein sequence | MFCSAIINYY VLRHHGAFGI IPSMYIRRTQ TRNTATGESY YTHRLVQSLR VGTKVRQVTL LNLGRHFAIG QNHWPTLCSR IDQLLSPQKT LISLDCPSQV EREAQRIVAQ LLTRQPEAIP SAKETETGLS PEDVQTVLVD SLEMSRPRSV GVEQVGLWAM GKAGFTELLA DVGLTGPQRA AAIGAIIGRM AAPGSERALH RWLSAQSGLG ELLDVDFETM SLMQFYRVSD LLIRNREAIE NRLFSKINDL FNLPGTVTLY DLTNTYFEGE AEGNSKAQRG RSKEKRCDSP LLTLGLVLDG SGFVRRSQIF PGNVSEGSTL EGMLKGLNAP NGALVVMDRG VATEANLVWL RDKGYRYLVV SRERERQFDF NGAACIETAA KEQIHIQKVL SDDGQEVRLY CHSQRRAEKE KGISRRFAER FEAGLTKLSE GLSKPRTTKN IDKLWERIGR LKEKNRGIGQ HYHIEIIPDD SGLQAQAIHW KQKPLDGTSL THPGVYCLRS NETGWDEERL WRTYITLTDL ESVFRSLKSE LGLRPLFHRK EERSDGHLFI TVLTYQIVQI IRQQLAEKGI HGRWSTLRDI LSSQCRITAS FRRPDGHSLQ VRKATRPEPE QQKIFQALGI HANPGGVKKM VV
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