| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1980 |
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| Symbol | |
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| ID | 4481293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2457511 |
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| End bp | 2458320 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639722724 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_865888 |
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| Protein GI | 117925271 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.340546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCGTAC TTCGCGAGAT CCCTTCCGTG AGGTACGCCT TTATTCAAGC TCATAGCAAA
AGCTACTCTG TCGAGTCTTT ATGCCGTGTT CTGGATGTTT CTCGTAGTGG ATTTTATGGC
TGGCTTAATC GAACCAGTAC GAGTAAGGCT GAAGAGAATC AACTGCTTGA AGAGTGGATA
GCAGAGATTT TCAAGGTGAG TCGATCAACC TATGGAACAC GGCGTATACG CAAAGCGTTA
AATGAGCATG GTGTACGAGT GAGTCGCCGA CGCGTCTCCA GAATCAAGAG GAAGCTTGGC
TTGGTTTGTA AAGCTCAGAA GCGTTATAAG GTTGTAACGA CAGATTCAAA TCACGCACTG
CCTATAGCGC CTAACCTTCT TGATCGTCAA TTCGATACGG AACGCCCTGA TAACGCCTAT
GTTGGTGACA TCACATATAT TCCGACCAAG GAAGGTTGGC TTTATCTGGC TGTTTGGATT
GACCTTTATT CCAGAGCTGT TGTCGGTTGG TCTATGGCAG ACCATATGAA AGCAGAACTG
GTAACAGACG CTTTACGCAT GGCCTTTTTC AAGCGCCGCC CAGAGGCCGG GCTGATTGTT
CATAGTGATC GTGGTAGCCA ATATGCATCT GAACTCTTGA GAAAATATCT GGATGAAAGA
GGCTATACAC AGAGTATGAG TCGCCGTGGT AACTGTTGGG ACAACGGTGT GCCACGAACT
CCTTATAGGA GGTGCTTCAT AAAAGATGAG AGTGTGGCCT CTCGGAATCG GGTTGCAGGA
CCGGGTTTCA AACAGCGTCG AGCTGCTTAG
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| Protein sequence | MCVLREIPSV RYAFIQAHSK SYSVESLCRV LDVSRSGFYG WLNRTSTSKA EENQLLEEWI
AEIFKVSRST YGTRRIRKAL NEHGVRVSRR RVSRIKRKLG LVCKAQKRYK VVTTDSNHAL
PIAPNLLDRQ FDTERPDNAY VGDITYIPTK EGWLYLAVWI DLYSRAVVGW SMADHMKAEL
VTDALRMAFF KRRPEAGLIV HSDRGSQYAS ELLRKYLDER GYTQSMSRRG NCWDNGVPRT
PYRRCFIKDE SVASRNRVAG PGFKQRRAA
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