Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1955 |
Symbol | |
ID | 4481183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2433259 |
End bp | 2434140 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639722705 |
Product | peptidase M23B |
Protein accession | YP_865869 |
Protein GI | 117925252 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.090565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0651038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAAC ATTTTACCAT TACCATCACC ACCCATAAGG GGGCCAAGCA TCTGCGAGTC TCCTTTTCGT GGTTGCGGGC GGTGGTTATC TCTGGGCTAG TGGTGGTCGC CAGTTTGCTG GGCTCCGCAG GATTGGGCAT CTATTTTTAT AAAGATGCCG AGCAGTTGCA AAGCAGTTTA CAAGCAACCC GTTCGGATTT GTCCGAGCTG CACTCTCTCA ATTTAGAGCT TCAACAGATC AGCTTAACGA AGGATGGGGT CATTAGCGAG GTACAGCAAA AATACCAAAC TGCCCGTGCC AAGGCCGATG CTCTAACCCT AGCCGCTACC AACAGTGAGC GGGTTAAACG CTATCTGTTA AGTCGCTTGC CCAATGGGCG GCCTATCTAT TCGCGGGTAG TTACCAGTAG CTATGGCGAG CGGCTGGACC CCATAACGGG TGAGCGCGAG TTCCATGGCG GCTTGGATAT GCGGGCTGCG ATTGGCACCG AGGTACGCGC AACCGCCGAT GGGGTGGTGG AGTTTGCCGG TGATCATAAA CGCAGTGGTT ATGGTCAACT GGTCATGGTG CGTCACGATT TTGGGTTTCG TACCATCTAT GCCCACCTGA GCAAAACCTT GGTCAAAGCG GGTAGTTTTG TGGGTAAAGG GGATGTTATT GCCCTGTCGG GTAATAGCGG TAAGAGCAGC GGGCCGCACC TGCATTACGA GGTGCGTTTT GTCCATCGTA AACTGGACCC TGCGCGGTTT GTGCGTTGGA GTGCCGACAC CTACGATACG ATTTTTGAAG AGAGGCGGGT GCGATGGCAC TCTTTGGTAA AACTGCTCAA CCGCCGTTTG AGCGATCCCA TACAACCATC ATTGCAACTG GCTCAAAAAT AG
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Protein sequence | MHKHFTITIT THKGAKHLRV SFSWLRAVVI SGLVVVASLL GSAGLGIYFY KDAEQLQSSL QATRSDLSEL HSLNLELQQI SLTKDGVISE VQQKYQTARA KADALTLAAT NSERVKRYLL SRLPNGRPIY SRVVTSSYGE RLDPITGERE FHGGLDMRAA IGTEVRATAD GVVEFAGDHK RSGYGQLVMV RHDFGFRTIY AHLSKTLVKA GSFVGKGDVI ALSGNSGKSS GPHLHYEVRF VHRKLDPARF VRWSADTYDT IFEERRVRWH SLVKLLNRRL SDPIQPSLQL AQK
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