Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1954 |
Symbol | |
ID | 4481182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2432858 |
End bp | 2433337 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639722704 |
Product | hypothetical protein |
Protein accession | YP_865868 |
Protein GI | 117925251 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0585612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0588157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCT TTGGTAAAAC TGCTCAACCG CCGTTTGAGC GATCCCATAC AACCATCATT GCAACTGGCT CAAAAATAGA AGGGCTTATT CAAAGCTCCT GCGATCTGCA TGTGGATGGT TTGTTGGTGG GCGAGGTGCA TTGCGAAGGG GAGCTCTCCA TCGGCACGCA GGGACGCATC GAAGGTCGGG TTTTTGCCCG GCGTTTGGTG ATTACCGGCA CCTTTGAAGG GCAGGCGGAT TGCGACGAGG TGGAAATCCT TGGTACCGGT CATGCCAGCG GGGAGATTGC TTCCCACATT CTGGTGCTGG AGCGGGGCAG CTTGTTCGAG GGTAACAGCC GCCAAAAATC GACGGAAGAG CTTAAACAGA GCTTAACCAG CGAGGTTAAG GCGTTACCCT TAACCGCCGA CTCAGTACCG CATGGGGGGA TTTCAACGGC ACCGATCCAT GCGGAGTTGC TGGTCGATGA AAAATCATAA
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Protein sequence | MALFGKTAQP PFERSHTTII ATGSKIEGLI QSSCDLHVDG LLVGEVHCEG ELSIGTQGRI EGRVFARRLV ITGTFEGQAD CDEVEILGTG HASGEIASHI LVLERGSLFE GNSRQKSTEE LKQSLTSEVK ALPLTADSVP HGGISTAPIH AELLVDEKS
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