Gene Mmc1_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1929 
Symbol 
ID4483255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2401983 
End bp2404358 
Gene Length2376 bp 
Protein Length791 aa 
Translation table11 
GC content49% 
IMG OID639722676 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_865843 
Protein GI117925226 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.108732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.835393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTG GACTTTCAAC GCGCTTTATT TTCTTTATCA GCGTGCTGCT GACGGTTGCT 
TTTGTCGCCA GCGGGGTGTT GATTATGCAG TTGGAAAAGC GCTTCATGGC GAGTCAATTT
TCCCAGCGTG CCGATGCCTT GGGCAACTTT GTCGCAAAAA TCGCCCCTGA ATCCATTCTC
TCTTTCGATG TTGTGCAATT AGAGCATTTT GCCGAAATGC TCATGGGTCA ACCCGATCTT
ATTTTAGCCG CCATCGTTGA CCGCAGTGGC GCACCATTGG CTATTCACCT GAATGAAAGC
CTCCCCCGTC CACTACACTT TAAATTTCGC GGTTCCTTAT TTGAAAGCGC CACCTTTAAG
AACCTCATTG CATTCTACAA AAACCACCCG CAAGCGATCT ATTTTTCCTA TCCTATCCGC
CACCAATACA ACCTGCTCGG TGAGGTGTTA ATCATTTTGG ATAGCTCCTC GCAAAGAGAG
GTGCAGCACA AAATTTTTCT ACAACGGATT ATCGTCGCCA TTGGTGTCAT TTTATTGGTG
GTTCTCTCCC TCTATCTAGG GTTTAAACGC TATATCTTAA GCCCCATTTT GGATCTGGTC
GAAGGGGCCA ATCGCATGGC CCATGGCAAT TATAAAGAAC CCATTCCCCG TACCACCAAA
GCAGAGTTGG ATACGCTCAC CGTCGCTGTT AACCATATGA TGCTCAGTAT TCGCACCAAC
ACCGAAGAGT ATGCCAAAAT TTTTCGTGCG GTCGAACAGA GCCCAGCCTC GGTGGTGATT
ACCGATGCTC AAGGCAATAT CGAGTATGTT AACCCAAAAT TTTGTCAGCT CACCGGCTAC
AGCGCCCAAG AAGTGTTGGG GAAAAATCCC CGCCTGTTAA AAAGTGGCGA GATGAGCCCT
AATTTTTATC GGGATTTGTG GCATACCGTC ACCACAGGTT TGGAGTGGCA TGGTGAATTT
TATAACCGCG CGCAAAATGG CTCGCTGTTC TGGGAGGCCG CCTCGATTTC TGCCATCCGT
TCTGAGCAAG GCAAAATTAC CCACTTCGTC GCGGTAAAAG ATGATATCAC CGCCCGTAAA
AAACTGGAAC GTGAGCTCCA ACAAGCCCGG GATCGGGCAG AGAGCTCTAA CCGCGCAAAA
AGTGAATTCC TGGCACTCAT GAGCCACGAA ATTCGCACCC CCATGAATGC CATTTTGGGT
ATGTCAGAAC TACTGGCCGA GAGCAATTTA AGTGGCGAAC AGCGCGAGTT GTTAACCGTA
CAACGCCGTG CTGCATTGGC CTTGCTGGAT CTAATCAACG ACATTTTAGA CCTTTCACGG
GTAGAGTCAG GCCGTTTGGA GTTGGATCAT GCCCCCATGC ATTTACCTGA TTTTTTTATT
GAGATACAGG ACCTGTTTCG CCAGCAGGCG ATCAAAAAAA ATCTGGCCTT CTCCATCACC
CTAGAAGATG ACTTACCTAA AACCTATTTT GCAGACCGAG CGCGTTTACG ACAGGTCATG
ATCAATCTGG TTGGCAACGC CATTAAATTT ACCCAACAAG GTGGTGTTTG GATAAGTGTT
GAGCGACTGA GTCAACAGGG AGAGATGGTC AAGCTAAAAT TTTCTGTGGT CGATAGTGGA
TGCGGCATCC CCAGCGAGGC CCAATCTCAA ATTTTTGAGC CCTTTACCCA AGCCGATGCC
TACGTTACCC GCCACCATGG GGGGACAGGT CTTGGGCTGA CCATCAGTCA ACGTTTAGTG
CAGCTGTTTG GGGGCACCTT GCAGGTGGAG AGCACCCCAA ACCAAGGCAG TCGTTTTTCC
TTTATCCTTA TATTGCAGGT GACCACCGAA GAGCGCTCAA CACAACCCAA TACACAGGCG
CAAACCACCC CCGAGCCTAA CACCGCACCA TCCAGCGGAG CTCCGAATGC TCGTATCTTG
CTGGCGGAGG ATATGCCAGA TAATGCACTA TTAATTAAAC GCTTTTTAAA AAATTACCCC
TGTGAATTAA CCCTTGTTAC CGATGGCAGA CAGGCGGTGG AGCAATTTTG CCGCACCACA
GCCCATTTTG ACTTGGTATT GATGGATATG CAGATGCCGG TCTTGGATGG TTATAGCGCG
GTTAGGGAGA TCCGCGAGTA TGAAGCGATC CATGATCTAG CCCCCACCCC TATCTTGGCA
CTGACCGCCC ACGCGCTTAA AAATGATGCC GAAAAGAGCC TCGCCGCTGG GTGTGATGAA
CACCTTACCA AACCCATTCG TAAAGAGGTA CTCTTGGCCG CCATTAGCCG TCACCTCTCC
TTAGCCAAAC ACGACAAGCC TCAACAGCAT GTTATAAATG ATATTTTACC AGCCCCCTCA
CGTATGCCGC AAGAGCCTGA CCCCAGTGCT TTATAA
 
Protein sequence
MRFGLSTRFI FFISVLLTVA FVASGVLIMQ LEKRFMASQF SQRADALGNF VAKIAPESIL 
SFDVVQLEHF AEMLMGQPDL ILAAIVDRSG APLAIHLNES LPRPLHFKFR GSLFESATFK
NLIAFYKNHP QAIYFSYPIR HQYNLLGEVL IILDSSSQRE VQHKIFLQRI IVAIGVILLV
VLSLYLGFKR YILSPILDLV EGANRMAHGN YKEPIPRTTK AELDTLTVAV NHMMLSIRTN
TEEYAKIFRA VEQSPASVVI TDAQGNIEYV NPKFCQLTGY SAQEVLGKNP RLLKSGEMSP
NFYRDLWHTV TTGLEWHGEF YNRAQNGSLF WEAASISAIR SEQGKITHFV AVKDDITARK
KLERELQQAR DRAESSNRAK SEFLALMSHE IRTPMNAILG MSELLAESNL SGEQRELLTV
QRRAALALLD LINDILDLSR VESGRLELDH APMHLPDFFI EIQDLFRQQA IKKNLAFSIT
LEDDLPKTYF ADRARLRQVM INLVGNAIKF TQQGGVWISV ERLSQQGEMV KLKFSVVDSG
CGIPSEAQSQ IFEPFTQADA YVTRHHGGTG LGLTISQRLV QLFGGTLQVE STPNQGSRFS
FILILQVTTE ERSTQPNTQA QTTPEPNTAP SSGAPNARIL LAEDMPDNAL LIKRFLKNYP
CELTLVTDGR QAVEQFCRTT AHFDLVLMDM QMPVLDGYSA VREIREYEAI HDLAPTPILA
LTAHALKNDA EKSLAAGCDE HLTKPIRKEV LLAAISRHLS LAKHDKPQQH VINDILPAPS
RMPQEPDPSA L