Gene Mmc1_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1886 
Symbol 
ID4483585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2344617 
End bp2345807 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content55% 
IMG OID639722631 
Productphosphoglycerate kinase 
Protein accessionYP_865800 
Protein GI117925183 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0022646 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.565163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC GTACCATCCG TGATATTGAC ATCAAAGGTA AGCGGGTTTT CATGCGTGTG 
GATTTTAATG TGCCCCTCAA TGAGGATGGC ACGGTCCGCA GCGATAAGCG CATTCAGGGT
GCGCTGCCCA CCATTCGTTA TGCCATTGAG CAGGGGGCTA AAGTAATTTT GGCTTCTCAC
TTGGGGCGCC CCTCAGGGGA TAAGTTTGAA CCCGAATTTT CACTAAAGCC TGCGGGTGAA
GCGCTTGCCG CGCTGTTGGG CCAACCGGTC AAGCTGGCCC CAGATTGTGT AGGGGCCGAG
GTCGAAGCAA TGGTGGCCGC CATGCAGGAT GGTGATGTGG TGTTGCTGGA GAATGTGCGT
TTTCACAAGG GTGAAACCAA GGCGGATGTT GAGCTTTCCA AGGGTTTTGC CAAGTTGGCC
GATGTGGTGG TAAACGATGC CTTTGGCACG GCACACCGGG CCCATTCGTC CAATGTGGGC
ATTACCGAGT TTGTGCGCCC TGCGGTGGCC GGGTTTTTGA TGGCCGATGA GATGGACTAT
TTTGATAAGG TATTGGGTGC GCCCGAGCGT CCGGTCATGG CCATTTTGGG GGGGGCCAAG
ATCTCAGGCA AGATTGATGT GATCGAGGCG CTGCTGGACA AAATGGATAA GATCATTATT
GGCGGTGGCA TGTCCTTCAC CTTCTTCAAA GCCATGGGTT ATGAAATTGG CAACTCGTTG
TGTGAAGATG AGATGTTGCC GGTGGCAGAA AAAACCTTGG CTAAAGCCAA AGAGAAGGGG
GTATCCCTGA TCCTGCCAGT GGATTGCGTG GCGGCGGACG CCTTTCGTGA GGATGCCAAT
ACCCAGATCT GCTCGGTAGA AGCACTACCC GCTGGCTGGA TGGGGCTGGA TATCGGGCCT
GAGAGCGTCA AGCTGTTTGC CAAGGCGTTG GAGGGGGTTA AAACCGTCAT TTGGAACGGC
CCCATGGGGG TGTTTGAAAT GGCCCCCTTT GCCAGTGGCA CCAACCATTT GGCCCATTTG
TTGGCGGAGA GTGATTGTCT TTCGGTGATC GGGGGTGGTG ATACGGCGGC GGCGGTTAAA
CAAGCGGGCG TGGCCAAGCA ACTCTCTTAC ATCTCCACTG GTGGTGGGGC CTCGCTGGAG
TTGATGGAGG GCAAACAGCT GCCCGGTATC ACCTCGCTGG ATGATAAATA G
 
Protein sequence
MNKRTIRDID IKGKRVFMRV DFNVPLNEDG TVRSDKRIQG ALPTIRYAIE QGAKVILASH 
LGRPSGDKFE PEFSLKPAGE ALAALLGQPV KLAPDCVGAE VEAMVAAMQD GDVVLLENVR
FHKGETKADV ELSKGFAKLA DVVVNDAFGT AHRAHSSNVG ITEFVRPAVA GFLMADEMDY
FDKVLGAPER PVMAILGGAK ISGKIDVIEA LLDKMDKIII GGGMSFTFFK AMGYEIGNSL
CEDEMLPVAE KTLAKAKEKG VSLILPVDCV AADAFREDAN TQICSVEALP AGWMGLDIGP
ESVKLFAKAL EGVKTVIWNG PMGVFEMAPF ASGTNHLAHL LAESDCLSVI GGGDTAAAVK
QAGVAKQLSY ISTGGGASLE LMEGKQLPGI TSLDDK