Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1886 |
Symbol | |
ID | 4483585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2344617 |
End bp | 2345807 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639722631 |
Product | phosphoglycerate kinase |
Protein accession | YP_865800 |
Protein GI | 117925183 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0022646 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.565163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAGC GTACCATCCG TGATATTGAC ATCAAAGGTA AGCGGGTTTT CATGCGTGTG GATTTTAATG TGCCCCTCAA TGAGGATGGC ACGGTCCGCA GCGATAAGCG CATTCAGGGT GCGCTGCCCA CCATTCGTTA TGCCATTGAG CAGGGGGCTA AAGTAATTTT GGCTTCTCAC TTGGGGCGCC CCTCAGGGGA TAAGTTTGAA CCCGAATTTT CACTAAAGCC TGCGGGTGAA GCGCTTGCCG CGCTGTTGGG CCAACCGGTC AAGCTGGCCC CAGATTGTGT AGGGGCCGAG GTCGAAGCAA TGGTGGCCGC CATGCAGGAT GGTGATGTGG TGTTGCTGGA GAATGTGCGT TTTCACAAGG GTGAAACCAA GGCGGATGTT GAGCTTTCCA AGGGTTTTGC CAAGTTGGCC GATGTGGTGG TAAACGATGC CTTTGGCACG GCACACCGGG CCCATTCGTC CAATGTGGGC ATTACCGAGT TTGTGCGCCC TGCGGTGGCC GGGTTTTTGA TGGCCGATGA GATGGACTAT TTTGATAAGG TATTGGGTGC GCCCGAGCGT CCGGTCATGG CCATTTTGGG GGGGGCCAAG ATCTCAGGCA AGATTGATGT GATCGAGGCG CTGCTGGACA AAATGGATAA GATCATTATT GGCGGTGGCA TGTCCTTCAC CTTCTTCAAA GCCATGGGTT ATGAAATTGG CAACTCGTTG TGTGAAGATG AGATGTTGCC GGTGGCAGAA AAAACCTTGG CTAAAGCCAA AGAGAAGGGG GTATCCCTGA TCCTGCCAGT GGATTGCGTG GCGGCGGACG CCTTTCGTGA GGATGCCAAT ACCCAGATCT GCTCGGTAGA AGCACTACCC GCTGGCTGGA TGGGGCTGGA TATCGGGCCT GAGAGCGTCA AGCTGTTTGC CAAGGCGTTG GAGGGGGTTA AAACCGTCAT TTGGAACGGC CCCATGGGGG TGTTTGAAAT GGCCCCCTTT GCCAGTGGCA CCAACCATTT GGCCCATTTG TTGGCGGAGA GTGATTGTCT TTCGGTGATC GGGGGTGGTG ATACGGCGGC GGCGGTTAAA CAAGCGGGCG TGGCCAAGCA ACTCTCTTAC ATCTCCACTG GTGGTGGGGC CTCGCTGGAG TTGATGGAGG GCAAACAGCT GCCCGGTATC ACCTCGCTGG ATGATAAATA G
|
Protein sequence | MNKRTIRDID IKGKRVFMRV DFNVPLNEDG TVRSDKRIQG ALPTIRYAIE QGAKVILASH LGRPSGDKFE PEFSLKPAGE ALAALLGQPV KLAPDCVGAE VEAMVAAMQD GDVVLLENVR FHKGETKADV ELSKGFAKLA DVVVNDAFGT AHRAHSSNVG ITEFVRPAVA GFLMADEMDY FDKVLGAPER PVMAILGGAK ISGKIDVIEA LLDKMDKIII GGGMSFTFFK AMGYEIGNSL CEDEMLPVAE KTLAKAKEKG VSLILPVDCV AADAFREDAN TQICSVEALP AGWMGLDIGP ESVKLFAKAL EGVKTVIWNG PMGVFEMAPF ASGTNHLAHL LAESDCLSVI GGGDTAAAVK QAGVAKQLSY ISTGGGASLE LMEGKQLPGI TSLDDK
|
| |