| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1855 |
|---|
| Symbol | |
|---|
| ID | 4481753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2300694 |
|---|
| End bp | 2301068 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639722597 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_865769 |
|---|
| Protein GI | 117925152 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000364045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA TCGATTTGAC CAAAGACAAC TTTCAAGAAA CCGTAACCGG TGACAACATT
GTCATCGTCG ATTTTTGGGC CTCGTGGTGT GGTCCATGTA AGGCGTTTGC GCCGATTTTT
GAAAAAGTGT CGGAAAGCAA TCCCGATGTG GTGTTCGCCA AGGTTAATAC CGACGAGCAA
CGGGAGCTGG CCATGGAGTT TCAAATTCGC TCCATTCCGA CCCTGATGAT TTTCCGGGAT
AACGTTATCA TTTTTTCCCA ACCCGGCATG CTACCCGAAC AGGCTCTGGT TGAGTTGATC
GGCAAGGCCA AAGAACTGGA TATGGACGAA GTGCGTAAAG AGATCGCCAA TGCTTCCCAA
GCAGAGGAGC ACTAA
|
|---|
| Protein sequence | MATIDLTKDN FQETVTGDNI VIVDFWASWC GPCKAFAPIF EKVSESNPDV VFAKVNTDEQ
RELAMEFQIR SIPTLMIFRD NVIIFSQPGM LPEQALVELI GKAKELDMDE VRKEIANASQ
AEEH
|
|---|
| |