Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1833 |
Symbol | |
ID | 4483986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2273920 |
End bp | 2275467 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722575 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_865747 |
Protein GI | 117925130 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.239593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAATA TGCCTCACTC TCATATGCAA GCTGCGTCCG AGCCCAGCTT GGATCTGGAT CACATAGAGC AGATGAAACG CTTTGTCGGG TTTACCGAAA AAGATGCGAG CATCCTCAAA AAATTACGCC CTGTGGCGGC CAAACATGCC ACAGCAGTTG TAAATACCTT TTATACCCGT CTTAGCGGCT TTGCCCATCT GGAAAAAATC ATTGGTGGCG CGGGTTCTTC GGTCGAGCGG CTCAAACGCA CTCAAGAAGA GTATTTGGTG CAGCTCTTTG ATGGTGAATA TGGACGGGAC TATTTCGTAC GCCGCTGGCG TATTGGCCAG ATACACAACA AAATTGGCTT AGAGCCCGAT TGGTATCTGG GGGGGTACAG TCTTTATCGT CAACTTTTGC TGCCCATCTT GCTGGATGTT TTTGATAATA AGCCAAAAAA AGTTCAAAGG GCGATGGCGG CAATCGACAA AATTCTTACC CTGGACAGTG AACTGGCAAT TGGTAGCTAT ATCGATGCGG TGATGGCGAG CCTGCGGGAT ATTAATGTCT CCAAAACCGA GATTGAAAAA AAAGTGGCCG ATTATGGCCA TTTTATTGAT CTGGTGGCCG ATGGCGACTT GACCCCGCGC TTGGCCATCG AGGGGGATGA TGGTTTGGCT CAATTGGGCA ACAACCTAAA TGTCATGACC GAACGCTTGG CTGAGATGGC CCGCTCCATC AACAGCGCCA GTAACGCCAT GCGCCACACC CTGAGTAGTG TGCATAAAGC GGTGGCGGAT CAATCCTCGG GTGCGGCACA GCAGGCTGCT GCGGTCAATG AGACCACCTC GACCTTGGTA GAGATTCGCA CCACTTCAAG CCAAACATTG GAAAAGGCCT CAGAGCTGGG TAAATCGGCA GAACGCACCC GTGAAGTTGG GGATCGTGGT TTGGATATGG TGGAAGAGAA TATTGCGGGT ATGCAGTCCA TTCGTAACCG GGTCGAGGGG ATTGCCGCCT CCATCTTGGC GCTTTCTAAA CAGACCCAGC AGATTGGTGA AATCACCGGC GTGGTAGCAG GTTTGGCGCA ACACTCCAAA ATGTTGGCGT TAAACGCCTC CATTGAAGCG GCTAAGGCTG GGGATAGCGG TAAAGGCTTT GCGGTGGTGG CGGCTGAGGT AAAAGATCTG GCCGAGCAAT CTGAGGAATC CACCGCGCAG GTGCAGAAAA TTTTGACCGA GATCCAACAC GCCACCGACC GCGCGGTTAT GGCCACCGAA GAGGGTGTCA AAGATGTGGA TCAAGGGGTG ATTCTCATGT CACGTACGGG CGAAGTGGTG CGCGACCTTA AGGATGTCAT TCACCAATCG GTTTTGAGCA GCCAACAGAT CGTTGCGGCG GTGCGTCAGG AAGCCGTTGG CATTGATCAG GTCTCCATGG CGATGAATGA GATCAATTCG GTGACCGGGC AGTTTGTGGA AGCGACCCAA AAAACCTCGG TAGCCAGTGA AGATCTCAAC CATCTTGCCA TCACTTTGCA AGATATGGTG GCGCGCTTCC GCATTTGA
|
Protein sequence | MANMPHSHMQ AASEPSLDLD HIEQMKRFVG FTEKDASILK KLRPVAAKHA TAVVNTFYTR LSGFAHLEKI IGGAGSSVER LKRTQEEYLV QLFDGEYGRD YFVRRWRIGQ IHNKIGLEPD WYLGGYSLYR QLLLPILLDV FDNKPKKVQR AMAAIDKILT LDSELAIGSY IDAVMASLRD INVSKTEIEK KVADYGHFID LVADGDLTPR LAIEGDDGLA QLGNNLNVMT ERLAEMARSI NSASNAMRHT LSSVHKAVAD QSSGAAQQAA AVNETTSTLV EIRTTSSQTL EKASELGKSA ERTREVGDRG LDMVEENIAG MQSIRNRVEG IAASILALSK QTQQIGEITG VVAGLAQHSK MLALNASIEA AKAGDSGKGF AVVAAEVKDL AEQSEESTAQ VQKILTEIQH ATDRAVMATE EGVKDVDQGV ILMSRTGEVV RDLKDVIHQS VLSSQQIVAA VRQEAVGIDQ VSMAMNEINS VTGQFVEATQ KTSVASEDLN HLAITLQDMV ARFRI
|
| |