| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1796 |
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| Symbol | |
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| ID | 4483676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2221595 |
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| End bp | 2224210 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639722538 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_865710 |
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| Protein GI | 117925093 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000183002 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGAT CTTTGATGGG TTCAACCCTC AGCAGAAGGT TATCCATTCA GGTTTTCATA
GTAGCTTTTT TATTGGCACT GGTGACCAGT AGCATTCAAA TTTCCACCGA TCTAAACCGT
GAAAAAGAGC GTATTGACCA AACCGTCCAT CAAATTTTGG CCATGATGTC CCACTCTGCC
GCCCTGGCAA CCTACCAACT GGATAAACAG TTGGCTGAAG AGGTCATGGA CAGTCTGTTT
GCCTATGGTC CCATTCGGTG GGCCTCACTC AAGGATGATT TTGGCCATGA ACTGGCCTCA
CGCTCGGCTC TGCATGACAC CCATGTCACC GATGCCCTCG CCGTATGGTT GCTTGGACGG
CAGACCGACT ATCAAATTCA ACTTGAGATG CATAAATCCA AACCACAACC GGTGGGTTTT
CTTACGGTAC AGTTAGATGG TCCGCGTATT GCCGGTGATT TTTTATTACG CGCCCTGCTC
ACCCTGCTGG ACATTATGGT GCGCACCATT GGCCTCTCTT TTATTCTTAC CCTACTGTTT
CATCTGCGTC TGACCAAACC CTTAAAGTCG ATGATTGACG ATCTTGACCA TACCGGCCCC
CACGATGCCA CCCGTACCGG TATTCACCCC CCTAAAGGAC ACGAAAATGA TGAGTTGGGT
GAATTAGCCG CGCATATGCA CAGCATGCTG ACCCAATACC GTCAGGTGCT TGGTGAAAGT
TTACAAAACG AGGCGCGCTT ACGGGCCGTG GTGAATGCCC TGCCAGATCT GGTTTTTTTG
GTTAGCAAAG AGGGGCGCTG CCTGGAGATG CTGACGACCC ATGAGGAGCT GTTACGCAAC
TACGCCCTCC AGACACCGGG CCATACTTTG GAGCGGTTGT TTATCTATGA CCAAGCGGAA
AAGCTGCAAA ACGCCATTAC CCGCACCCTT ATCACAGGTC GTTTGCAAAC GCTGACCTTT
TCTATTACTG GCCGTGATAA AGCGTACACG TTTGAAGCCA GACTGACCCC CTTTGGTCAA
TCTGGTGGGC AACAGCCTGA TTCAGTGGTC ATGGTCGCCC GCGATATCAC CACCCAGCAA
GATGCGGTTA ACCAACTTAA AGACCAACTA CATTTCCAAA ATGTGCTGTT GGATAATATT
CCAACCCCGG TTTTTCATAA GGATAGCAAT GGTCGATATT TGGGCTGCAA CAAAGCCTTT
GAGGATGTAT TAGGCTTTGA TAGTGAACAA CTTGTTGGAA AAACCGTGTT TGACATCGTA
CAGCAGGATC TTGCCCGTCA CTATGACCAA AGCGATCAAT TTCTTTTTCT TAATGGTGGC
AAACAATCTT ATGAAACCGT ACTAACCTAT GCCGATGGTC TACGCCACGA TATCATTCTC
AATAAGGGGG TGTTTTATAA CAACAATGGC GAAATCGCAG GGCTTGTTGG TGTTATTCAG
GATATAACCG ACCGTAAGGC TATGGAAAAC CAGTTGCGTC AGGCACGCAA AATGGAGGCG
GTGGGTACTT TGGCAGGGGG CATTGCCCAC GATTTTAATA ATATTCTTAG TGCCATCTTA
GGCTTTACCG AGCTTACCTT TAATCAGGTT CCCCAAGAGA GCCGCGCTTA TCGTAATCTG
CAACAGGTCT ATGATGCCGG TAACCGCGCA CGAGATTTGG TCAAACGACT GCTGGACTTT
AGCCGCCCAT CGGATGTTGG CATGGTGGCG ATGGATCCCA TCACCGTCAT TCGTGATGCT
TTAACCCTGC TTAGAGCTAC CCTGCCCAGC TCCATTCAGA TCATCACCGA TATACCCAAA
ATGGAGTTGC TGGTTAGAGC CGATCCAACC CAACTTCAGC AAGTAATGAT GAATCTCTGC
ACCAACGCAG CCCGCGCCAT GCGCAAAGAT CAGGGGGGCA GCCTTACCGT CACAGTCAAA
CGGCAAGAGA TTCGCGAAGA GTTACCCAAC GCGCTCCATA AAGGTAACTA TATCTGCATC
TCTGTGCAAG ATACCGGTTG TGGCATTCCA ACACACCATC TGGAGCATAT TTTTGATCCC
TTTTTTACCA CCAGCAAATT AGGGGAAGGA ACCGGTTTGG GACTCTCTGT CGTACACGGT
ATTGTGCATA AACACGGGGG CACGGTGACG GTGGAGAGCG AGATAGGGGT TGGCAGTGTG
TTCCGCGTCT ATTTACCGAC CCTAGAGCGA GGCTTTGACG CCCCGCCCCC ACCAAAACCT
GCCCAATTGG GCGAAATTCC ACAGGGCATC CCCGAAGCCA GTATTATGCT GGTGGATGAC
GAACCGGATG TGCTAGAAGC CGCCCAATTG CAGTTAAAAA GAGCGGGCTT TTATGTGCAG
CCATTCCAAA ATCCACTGCA CGCATGGGAA GCTTTTCAAC GCCAACCCGA CGCCTATGAC
CTGATCATTA CCGATCATAA TATGCCGGGG ATGGTGGGAT CACAATTGGC CAAACTCATT
TTGCAGCTAC GTGACGATAT TCCTATTATT CTATGCACCG GATATAGCGA AGAGTTAGAT
GAAGAGCAGG CCAAAGCAAT GGGCATACAG GCTTATTTAA TGAAACCCCT GCTGGGTAAA
GAGTTGGTGC ATGAGGCCAC ACGCCTGCTT ACTTAA
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| Protein sequence | MVRSLMGSTL SRRLSIQVFI VAFLLALVTS SIQISTDLNR EKERIDQTVH QILAMMSHSA
ALATYQLDKQ LAEEVMDSLF AYGPIRWASL KDDFGHELAS RSALHDTHVT DALAVWLLGR
QTDYQIQLEM HKSKPQPVGF LTVQLDGPRI AGDFLLRALL TLLDIMVRTI GLSFILTLLF
HLRLTKPLKS MIDDLDHTGP HDATRTGIHP PKGHENDELG ELAAHMHSML TQYRQVLGES
LQNEARLRAV VNALPDLVFL VSKEGRCLEM LTTHEELLRN YALQTPGHTL ERLFIYDQAE
KLQNAITRTL ITGRLQTLTF SITGRDKAYT FEARLTPFGQ SGGQQPDSVV MVARDITTQQ
DAVNQLKDQL HFQNVLLDNI PTPVFHKDSN GRYLGCNKAF EDVLGFDSEQ LVGKTVFDIV
QQDLARHYDQ SDQFLFLNGG KQSYETVLTY ADGLRHDIIL NKGVFYNNNG EIAGLVGVIQ
DITDRKAMEN QLRQARKMEA VGTLAGGIAH DFNNILSAIL GFTELTFNQV PQESRAYRNL
QQVYDAGNRA RDLVKRLLDF SRPSDVGMVA MDPITVIRDA LTLLRATLPS SIQIITDIPK
MELLVRADPT QLQQVMMNLC TNAARAMRKD QGGSLTVTVK RQEIREELPN ALHKGNYICI
SVQDTGCGIP THHLEHIFDP FFTTSKLGEG TGLGLSVVHG IVHKHGGTVT VESEIGVGSV
FRVYLPTLER GFDAPPPPKP AQLGEIPQGI PEASIMLVDD EPDVLEAAQL QLKRAGFYVQ
PFQNPLHAWE AFQRQPDAYD LIITDHNMPG MVGSQLAKLI LQLRDDIPII LCTGYSEELD
EEQAKAMGIQ AYLMKPLLGK ELVHEATRLL T
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