Gene Mmc1_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1692 
Symbol 
ID4481712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2093792 
End bp2094469 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID639722435 
Producthypothetical protein 
Protein accessionYP_865607 
Protein GI117924990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.015886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA AGACCCTCTC CTATGCTCAG GCACGTCCAC TTATGAAGGC TGGGGATGTC 
ATCGCCTTTT CCGGTAAAGG CCATTTTTCT GAGGTGATCA AGCTTGCCAC CCGTTCAGGG
GTTTCCCACG TTGGGGTAGT TTTACAAACC CAGGTGATGG AGATCGAGAG CGGCAAATTT
TTTAACCAGA TTATTGAATC CGCCACAATC CGTGGTTTTA GCGGGGTAAG CATTTCGCTT
TTATCGGAGC GTTTGGATGA GTATGAAGGG GATATTTGGT GGTTACCAAT TCAAGCAAAA
TTAACGGAAA ACCCGGAAAA TCATAAAGCT TTTTATAATT TTCTGTTCCA GCAAGCCAAA
CTTAAAAAGC CGTATGATTT TCCTCAAGCG GTTCAATCTG CGGTGGATGC CATGGACGAG
CTACCCTTTG GCCTGCATGG TCCTGGCTAT AATCGTGAGG ATTTTAGTCG ATTTTTCTGC
TCAGAACTGG TGGCTGCCGC GCTGGAGAGG GCCAAAATCG TTGGCACCAT CAACGCTTCG
GAGGTGACGC CCATTGATTT GTGCCGCTGG AATATCTATG AGCAGGATTA CTATCTGCTC
AAGCAGGGCA ATCCTGACAA ACCAGCCCAA TCCATTACCC GCTTTAACAG CATGGACCCT
GCTTTATGGA ATCTGTAA
 
Protein sequence
MAMKTLSYAQ ARPLMKAGDV IAFSGKGHFS EVIKLATRSG VSHVGVVLQT QVMEIESGKF 
FNQIIESATI RGFSGVSISL LSERLDEYEG DIWWLPIQAK LTENPENHKA FYNFLFQQAK
LKKPYDFPQA VQSAVDAMDE LPFGLHGPGY NREDFSRFFC SELVAAALER AKIVGTINAS
EVTPIDLCRW NIYEQDYYLL KQGNPDKPAQ SITRFNSMDP ALWNL