Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1692 |
Symbol | |
ID | 4481712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2093792 |
End bp | 2094469 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639722435 |
Product | hypothetical protein |
Protein accession | YP_865607 |
Protein GI | 117924990 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.015886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCATGA AGACCCTCTC CTATGCTCAG GCACGTCCAC TTATGAAGGC TGGGGATGTC ATCGCCTTTT CCGGTAAAGG CCATTTTTCT GAGGTGATCA AGCTTGCCAC CCGTTCAGGG GTTTCCCACG TTGGGGTAGT TTTACAAACC CAGGTGATGG AGATCGAGAG CGGCAAATTT TTTAACCAGA TTATTGAATC CGCCACAATC CGTGGTTTTA GCGGGGTAAG CATTTCGCTT TTATCGGAGC GTTTGGATGA GTATGAAGGG GATATTTGGT GGTTACCAAT TCAAGCAAAA TTAACGGAAA ACCCGGAAAA TCATAAAGCT TTTTATAATT TTCTGTTCCA GCAAGCCAAA CTTAAAAAGC CGTATGATTT TCCTCAAGCG GTTCAATCTG CGGTGGATGC CATGGACGAG CTACCCTTTG GCCTGCATGG TCCTGGCTAT AATCGTGAGG ATTTTAGTCG ATTTTTCTGC TCAGAACTGG TGGCTGCCGC GCTGGAGAGG GCCAAAATCG TTGGCACCAT CAACGCTTCG GAGGTGACGC CCATTGATTT GTGCCGCTGG AATATCTATG AGCAGGATTA CTATCTGCTC AAGCAGGGCA ATCCTGACAA ACCAGCCCAA TCCATTACCC GCTTTAACAG CATGGACCCT GCTTTATGGA ATCTGTAA
|
Protein sequence | MAMKTLSYAQ ARPLMKAGDV IAFSGKGHFS EVIKLATRSG VSHVGVVLQT QVMEIESGKF FNQIIESATI RGFSGVSISL LSERLDEYEG DIWWLPIQAK LTENPENHKA FYNFLFQQAK LKKPYDFPQA VQSAVDAMDE LPFGLHGPGY NREDFSRFFC SELVAAALER AKIVGTINAS EVTPIDLCRW NIYEQDYYLL KQGNPDKPAQ SITRFNSMDP ALWNL
|
| |