Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1669 |
Symbol | |
ID | 4480731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2071031 |
End bp | 2071702 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722412 |
Product | outer membrane lipoprotein carrier protein LolA |
Protein accession | YP_865584 |
Protein GI | 117924967 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.632485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.483182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGAC CGTGGATAAG GCCCCTGTGG GTTCTGCTGG TCATGTGGTG GGTGCCGCTC GGCTGGGCTG CCGAGCCACA AGATGTGCCA AAAGCTGAGG CAACCCCCCA TGCTGCGGTG GTGCGTCTGC AAGCCTTTGT GGATGGTATT ACCACCATGG AGGCCACTTT TATCCAGCGG GTACGCAGTA ATGATAGCAC AGAGATCGAA GAGAGTCGTG GCCGTTTTTT GGCCCTGCGC CCCGGTAAAT TCCGCTGGGA TTATGAAAGC CCAGAAGTGC AACATATCGT CTGTGACGGT AAAACGGTCT GGCTGCACGA ACCTGAATTG CAGCAGGTTA CACGCATCAG TGCCGACCGG CTAGACCGGG CTCCAGCAGC CTTTTTGGTT TCTAAAAGCC GTATTGCTGA AAGCTTTTTT ACCAAAGTCG TACACAATGA AAAATTGGAC CTCGATACGG TCTTTCTAAG CCCCAAGGCC GAAGCGGCTC ACTTTAAAGA GGTGGCCATC ACCCTGGATA AAAGCGGCCA AGAGATTCAG TTTTTTCAAG TTACCGATAC CCTTGGCAAC CGCTCCTATT TTCAGTTTGT AGGTATGCGC ATGAACCAAA GGGTGGACGA AAGCCGTTTT GAGTTCCAAA TCCCCAAAGG GGCTGATTTA ATCGAAGGGT AA
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Protein sequence | MSRPWIRPLW VLLVMWWVPL GWAAEPQDVP KAEATPHAAV VRLQAFVDGI TTMEATFIQR VRSNDSTEIE ESRGRFLALR PGKFRWDYES PEVQHIVCDG KTVWLHEPEL QQVTRISADR LDRAPAAFLV SKSRIAESFF TKVVHNEKLD LDTVFLSPKA EAAHFKEVAI TLDKSGQEIQ FFQVTDTLGN RSYFQFVGMR MNQRVDESRF EFQIPKGADL IEG
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