| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1659 |
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| Symbol | |
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| ID | 4484036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2061661 |
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| End bp | 2062551 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722402 |
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| Product | tyrosine recombinase XerD subunit |
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| Protein accession | YP_865574 |
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| Protein GI | 117924957 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.538818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATT ATCGCTTGAT GGAACGATTT CTCGATGAGC TGCTCATTGA GCATGGTCTT
GCGGCCAACA CCCTGATAGC CTATCGGCGC GACTTGGATG CTCTGCGCAG CTTTTGCGCC
AGTCGCAACC TGACCCTGCC CGAGATCCAA CGCCAGGATG TTTTGGAGTA TATTGGTGAG
CTGGCACAAA AAAGCCTGAC CCCCTCAACG GTAGCCCGCA AACTCTCCGC TATGCGGCGG
CTATTTCGGC ATCTGGTGGA TAAAGGTATT CGTAGCGAAG ACCCCACCGG TGGTGTCTAT
CGACCTAAAC CCCAACGAAA ACTGCCCAAC ACCCTAAGCG AAGCGGAGAC CGAAGCACTG
CTCTATGCGC CGGATACCAG CACCGAATTG GGTATGCGGG ATGCCGCCAT GCTGGAGCTG
ATGTATGCTA CCGGTCTACG GGTTTCGGAA CTGGTTACGC TGACCCTGGA CGGTTTGGAC
GAAGAGAATG GTTTTGTGCG GGTGATCGGT AAAGGCAATA AAGAGCGCAT TGTACCCATG
GGGGAGGCCG CCACCGAAAT GGTGATCCGC TACCGGCACA GCGCCCGCCA AGTGTTGCTT
AAAGGGGGGC GCTGTAATGA CCTGTTTTTG AGCAATCGCG GGGCCGCAAT GACGCGGCAT
AATTTTTGGC ACATTGTCAA ACGCTATGCC TATGAGGCAA ATATTATGAA ACCGCTCTCC
CCACATGGTA TCCGGCACGC CTTTGCCACG CACCTGCTCA ACCATGGGGC TGACCTGCGG
GCGGTACAGA TGATGTTGGG GCATGCCGAT ATTTCAACCA CCGAAATCTA TACCCACGTC
GCCAATGCTC GTCTAAAAAA ATTGCACGAC CAACTGCACC CTAGAGGATG A
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| Protein sequence | MSDYRLMERF LDELLIEHGL AANTLIAYRR DLDALRSFCA SRNLTLPEIQ RQDVLEYIGE
LAQKSLTPST VARKLSAMRR LFRHLVDKGI RSEDPTGGVY RPKPQRKLPN TLSEAETEAL
LYAPDTSTEL GMRDAAMLEL MYATGLRVSE LVTLTLDGLD EENGFVRVIG KGNKERIVPM
GEAATEMVIR YRHSARQVLL KGGRCNDLFL SNRGAAMTRH NFWHIVKRYA YEANIMKPLS
PHGIRHAFAT HLLNHGADLR AVQMMLGHAD ISTTEIYTHV ANARLKKLHD QLHPRG
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