| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1603 |
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| Symbol | |
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| ID | 4481571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1979245 |
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| End bp | 1981473 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722345 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_865518 |
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| Protein GI | 117924901 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.213758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.272046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC AGCCCGACAT CATCTATACC ATCGTTGATG AGGCTCCTGA GCTTGCGAGC
GGTTCCTTTT TGCCGATTAT CCAGGCTTTC ACCAAACCCG CTGGCATATC TGTCGGTACT
AAGGACATCT CTTTGTCCGG CCGTATCATT GCCGCTTTTA ATGACAAGCT GCCTGCTGAA
CAGCGCATTC CCGATGCCTT AGCTGAACTG GGTGAGATGG TTAAAACCCC AGGGGCCAAT
GTGATCAAGC TGCCCAACGT ATCGGCCTCC ATGCCCCAGC TTAAAGCCGC CATCAAGGAG
CTGCAAGAGC AGGGTTATGC CCTACCCGAC TACGTAGACA GCCCCTCTTC GGAGGAAGAG
AAGGACAATC AAGCCCGTTA TGACAAGATC AAGGGCTCTG CGGTGAACCC GGTCCTGCGT
GAGGGTAACT CGGATCGTCG CGCCCCCAAA GCGGTGAAAG AGTTCGCCAA AAAGAACCCC
CATAGCATGG GCGAGTGGAA ACCGGACTCC AAGACCCACG TGGCGCACAT GCAATCGGGT
GACTTTTTCT CTCACGAGAC CTCCACCACC GTGGATAGCG CCGATGCGGG CAGCGCCAGC
ATTGTGTTGA CAACCAATAG TGGCGAAACC AAAGTGCTCA AGAGCGATGT TAAGCTCAAA
GAGGGCAGCG TGGCCGACGC CACTTTTATG AGCGCCAAAG CGCTTTACAG CTTTTTAGAA
GAGCAGATTG CCGACGCCAA AGCCAAGGGT GTGCTCTTTT CCCTACACAT GAAAGCCACC
ATGATGAAGG TCTCTGACCC CATCATCTTT GGCCACTGTG TTAAGGCTTA CTTTAAGCCA
GTGTTTGCCA AGCATGGCGA GACCTTTGCC AAGCTGGGCA TCAATGCCAA CAATGGTATT
GGCGATGTCT ATGCCCGCAT TGGTGGTCTG GATGCTGCGT TGAAAGCCGA GATCGAAGCC
GACATGCAAG CTTGCATGGA TGAAGGCCCC GATATGTACA TGGTCAACTC CGACAAGGGC
ATTACCAACC TACATGTGCC CAGCGATGTG ATCATTGACG CCTCGATGCC TGCCCTTATT
CGTGGCGGTG GTCAAGGTTG GGGTCCTGAC GGCAAGCCCG GCGATACCAA AGCGGTTATT
CCCGACAACA GCTATGCTGG TGTCTATGAT GAGACCATTA AATTTTGTAT TGCCAATGGT
GCCTTCAACC CCTCCACCAT GGGTAGTGTT GCCAACGTGG GCCTGATGGC GCAAAAGGCC
GAGGAGTATG GTTCTCATCC TCAGACCTTT GAAATTCCCG CCGACGGTAC TGTGCGCGTG
GTAAGTGCCG CAGGTAACAC CCTGCTGGAG CACACTGTTG AGGCAGGCGA TATCTGGCGC
ATGTGCATCA CCAACGACGC CCCCATTCGC GATTGGGTCA AGCTGGCGGT CAACCGTGCC
CGCGCTGCGG GTACCCCCGC GGTGTTCTGG CTGAATAAAA ACCGCGCTCA CGATGCTCAG
TTGATCAAAA AGGTCGAGAG CTACCTTAAA GATCACGACA CCAGCGGCTT AGAGCTGCCT
GTCATGGCCC CTGTTGAGGC CACCCGTTAC TCCTTGGAGC GCATGGCTAA GGGGCAGGAT
ACCATCTCCG TCACCGGTAA CGTGCTGCGG GATTATTTGA CCGACCTCTT CCCCATTTTA
GAAGTCGGTA CCAGCGCCAA GATGCTCTCC ATCGTACCTT TGATGAATGG CGGCGGTCTG
TTTGAAACCG GCGCGGGTGG CTCTGCCCCC AAACATGTGC AGCAGTTTGT GGAAGAGGGT
TTCTTGCGTT GGGACTCTTT GGGTGAGTTC TGTGCCTTAG GGGCTTCTTT GGAGCATCTG
GCGGCGGTTA AGAACAACCC CAAAGCCAAT GTTATTGCGC AGGCCCTGGA TAGTGGTATT
GGCAAACTGC TGGATAACAA CAAATCCCCA GGTCGTAAAG TGGGGCAGTT GGACAACAAA
GGCAGCCACT ACTACCTCGC CACCTATTGG GCCGAGGCAC TGGCTGCTCA AGATGAAGAT
GCCGAGCTCA AAGCCCATTT TGGCCCCATT GCGGAGAAAT TGGCGGCCAA TGAGGCCACC
ATTGTGGCCG AGTTGAGCAC CACCCAAGGC AAGCCGGTGG ATATCGGCGG CTACTACCGT
CCTGACGCGG CCAAGGTTGC CGCGGCTCAG CGTTGCAGCG CTACGCTCAA TGCCATCATC
GACGCCTAA
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| Protein sequence | MSEQPDIIYT IVDEAPELAS GSFLPIIQAF TKPAGISVGT KDISLSGRII AAFNDKLPAE
QRIPDALAEL GEMVKTPGAN VIKLPNVSAS MPQLKAAIKE LQEQGYALPD YVDSPSSEEE
KDNQARYDKI KGSAVNPVLR EGNSDRRAPK AVKEFAKKNP HSMGEWKPDS KTHVAHMQSG
DFFSHETSTT VDSADAGSAS IVLTTNSGET KVLKSDVKLK EGSVADATFM SAKALYSFLE
EQIADAKAKG VLFSLHMKAT MMKVSDPIIF GHCVKAYFKP VFAKHGETFA KLGINANNGI
GDVYARIGGL DAALKAEIEA DMQACMDEGP DMYMVNSDKG ITNLHVPSDV IIDASMPALI
RGGGQGWGPD GKPGDTKAVI PDNSYAGVYD ETIKFCIANG AFNPSTMGSV ANVGLMAQKA
EEYGSHPQTF EIPADGTVRV VSAAGNTLLE HTVEAGDIWR MCITNDAPIR DWVKLAVNRA
RAAGTPAVFW LNKNRAHDAQ LIKKVESYLK DHDTSGLELP VMAPVEATRY SLERMAKGQD
TISVTGNVLR DYLTDLFPIL EVGTSAKMLS IVPLMNGGGL FETGAGGSAP KHVQQFVEEG
FLRWDSLGEF CALGASLEHL AAVKNNPKAN VIAQALDSGI GKLLDNNKSP GRKVGQLDNK
GSHYYLATYW AEALAAQDED AELKAHFGPI AEKLAANEAT IVAELSTTQG KPVDIGGYYR
PDAAKVAAAQ RCSATLNAII DA
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