| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1565 |
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| Symbol | |
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| ID | 4484183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1928255 |
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| End bp | 1929307 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722307 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_865480 |
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| Protein GI | 117924863 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0230449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT GGCACGAACC ATCATTGGAA GATCAGGCAC AACCGACTCG GCCCAGCGCT
GCGGAGCCAG AGAGTCATCT TCACCAGATG CTAAAGTCTA TGGAGGAGAG CCGTTTTGCC
GAGCGGGCCA TGTTGGAAAG CTTGGTTAAA GAGGGGCTCA ATGAACAAAA ACGGGGGCGG
CGCAGTAAAA ATCTGTTTCG ACTGTTTATT GTTCTTTATT TGGTGGCGAC CATGGCGCTG
CTCAACCGGG GTGACTTTGA AGAGGGCAGC AGCGCCAGCG CCAGTGAACC CCATGTGGCG
GTGGTTAAAA TGGTGGGGGC CATCATGCCA GAGTCGGATC TGGATGCTGA TGAGGTCATA
AAAAATCTGC AAGAGGCCTT TAAGGACGAA AATACCAAAG CGGTGGTTTT GCGTATTAAT
AGTCCAGGTG GCAGTCCTGT GCAGGCGGGC ATGATCTACG ATGAAATCGT GCGGCTCCGG
GCTGAACATA AAGAGATTAA GGTCTATGCC GCTTTGGAGG ATCTGTGTGC CTCCGGGGGT
TACTACGTGG CCGCCGCTGC GGATGAGATC TACGCCGATA AAGCAACCCT GGTTGGCTCT
ATTGGAGTGA TTATGAAGGG GTTTGGTCTG GAAAAACTGG CCGAACAGGT GGGGCTGGAA
AATCGCACGC TTACCGCTGG TAACCATAAA GCCTTTTTGG ACCCCCTGGC TCCAGTGGAT
AGCGCTGAAA AGGCCCACGC CCAAGGGTTG CTTAACCAGA TTCACGCGCA GTTTATTGAG
GTGGTAAAAA AAGGTCGGGG TAAGCGCTTG AAGGCGGACG ACGACAAGCT GTTTAACGGG
CTCATCTGGA CCGGTGAGCA AGCCGTGACC CTGGGTTTGG TGGACGGTTT GGGTTCGGTG
GATTGGTTGG CACGGGAAAA GATCAAAATC ACCGAGGTGA TGGAGTATCA CCAAAACCGG
CATTGGTCAG ATCGCTTTTT TAAAGAGATC TCCAGCAGCA CCGGTACTCT GTTTATGAAA
TTAAGCCAGC AGCAACCCTA CTTAGGCTGG TAA
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| Protein sequence | MADWHEPSLE DQAQPTRPSA AEPESHLHQM LKSMEESRFA ERAMLESLVK EGLNEQKRGR
RSKNLFRLFI VLYLVATMAL LNRGDFEEGS SASASEPHVA VVKMVGAIMP ESDLDADEVI
KNLQEAFKDE NTKAVVLRIN SPGGSPVQAG MIYDEIVRLR AEHKEIKVYA ALEDLCASGG
YYVAAAADEI YADKATLVGS IGVIMKGFGL EKLAEQVGLE NRTLTAGNHK AFLDPLAPVD
SAEKAHAQGL LNQIHAQFIE VVKKGRGKRL KADDDKLFNG LIWTGEQAVT LGLVDGLGSV
DWLAREKIKI TEVMEYHQNR HWSDRFFKEI SSSTGTLFMK LSQQQPYLGW
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