| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1533 |
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| Symbol | |
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| ID | 4482858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1884052 |
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| End bp | 1886982 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639722275 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_865448 |
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| Protein GI | 117924831 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAAT GTAGACACAG CAGGGTAGGT GTGAGCAGAC GCGCTGCCCT GTTTTTAGCG
CTCATCGTGG TGATGTCGTC CGGCCTATCT GCTGGCTTGG CAGCGCCCAA TCTGGCCGAG
GATGTTCTGT TGGCTGGCCC GCAGCGTACC GCGTTGTGGC CTCATGGGGT CGCGCTTCCA
ACAGACCGTG GGAGCCTGTT ACAACTGGCC AATCAAGGCT ACCGTCGAGC CCAGTTTTTT
ATGGGGCTTT ATCTGGATTA TGGTATCGGC GGAGAGGCTC AACCTTTTGA GGCCTTTCAA
TGGTATAGCC GCGCAGCGGG GCAGGGCAGT CGTTGGGCTT GGATTAAATT GGGTGATCTC
TATTTCCGTG GCCGTGGCAC CGCACGGGAT GCCAAAAAAG CGCTGCAATG GTACCTGCAT
GCCGGGGAAA ATGGCGAGCC TAGTGGCTAT CTGGCTGCCG CAATGGTACA GATTCGTGGT
ACGGGCGATA GCATTGATTG GCCAACCGTT TTACAGCGTG TGCACAAGGC TGTGCAAGCG
GGGGTATTGG AGGGGCACAC AGCACTCTGT CTCTTAGGGG TGCGACATGT GGTGGCGACG
CAGCTACCCC CAGAGCAGAC CCGCCAACAG TGCCAAATGA GTGCGGATGG GGGGCAGCCC
TTTGCCGCGA TTTTGATGGC CCAATGGCTG GCTGAGCAGC ATAACGAGAA CAATCCCCAA
CTGCAAAAAC AGGTCGAACA GTGGTACGAG CGGGCTGCTG CCATGGAGGT AGGTAACTTG
GCCGTTCTGC CCGAGGCACC ACTGGTGATG GCCGAGCATT TCCCCGTTGT TTGGATAGAG
GCTCTAGAAC CACTGGTCAG TGCCAACCGC GCCAGCGTGC CGCGTGCGGC CTATCGTGCT
GGGGTGGCGC TGCTCAAGTC GGGGCAGGGT TTTGTGGCGC GTAGTCGCGG CGTGCGCTGG
TTACAGAAGG GCGCGGAGTT GGGCGATGCC AATGCTCAAT TTAGACTGGG GCTTGCCTAT
GCCCAGGGTG AAGGGGTGGT GGTTAATCCA GAACGCGCCA TTTACTGGTA TACCCTTGCG
TCGGAGCAGG GTGAAGTTTC GGCACAGTTT AATTTGGCCT TGCTCTACTA CCAAGGGCGT
TTGGTTGAGC AGGATTTTAC CAAGGCCCGT TTTTGGTTTG AGCATGCCTC GGAACAGGGT
GACGTGCAGG CGCGGGATCA TCTGGGGGAT ATTTATCGTC ATGGCCGGGG CATACCGGTC
AATATAGCCG AGGCCATGAA GTGGTACCGC CACGCTGCCG AGCAGAAAAA TGTCTACGCG
CTTACCTCAA TGGGGGATAT CTACCAAGCG GGTGAGGGGG TTGCCGAGGA TGCCGCAGAG
GCCGCAAAAT GGTACCGCAA AGCGGCGCTG CTGGGTCATG CCCCGGCGCA GGGTAACTTG
GCCGACCTTT ATCGACAGGG TAAAGGGGTA GAAAAGGATC TTAATCAGGC CGCACAGTGG
TATACAAAAG CTGCTGAACA GGGGGACATG GTCTCTCAAA ACTGGCTGGG CACGCTCTAC
CTGGATGGGG ACGGTGTTGA AAAAAATCCC CAGTTGGCGC AGCAATGGTA CGAAAAATCA
GCGGCTCAAG GGTACGCTTT TGCCCAGAAC AATTTGGCGG TTATGTTGCG GGATGGCTTG
GCGGGCAAGG CTGATTATAA GCGAGCCAGA CAGCTCTTTT TGTTAGCTGC TCGGCAAAAC
AGTGGTGATG CGCAAAATAG TCTTGGCGTG CTTTATGAAA AGGGGTTAGG GGGCGAAACC
GATCCCATTG AGGCTGCTGC GTGGTATCGT AAGGCCATCC AATATGGCAA TGACAGTGCC
CGTTATAACC TTGGCATGCT CTATTATGCC AACCGTCAAT TTGGTAGTAT AGAAGAGGCC
CTGCGGCTGT TGCAAGATGC CCAAAGTGCC GGGGTAGCCC AGGCTCAAAC CGCACTGGCT
CGGATCTATC TTAGTAAAGA AAACAGCCAC TATAATCCTG AGTTGGGCGA GCGCTTTTTG
CGTGAAGCCG CAGAACAGGG TGGGGCGGAT GCACAGGCTT TATTAGGGGT TTTATTAACC
TTTAAAACCC CTCTTAAACA GGATTATGAG CAGGCTCTAA GGTGGTTAAA AAAGGGTGCT
GAAGGGGGGA GTCCGGAGGC GCAGTTTCAC TTGGGCTATA TGTTACATTT GGGGGTAGGG
CTGGCCCCCA ATGCTCACCG TGCGGTGCAT TGGTACCGCA AAGCCGCAGA ACAGGGCTTT
GCTGAAGCGG CCAACAATTT GGGGACCCTC TATTTCCAGG GTAATGGGGT TGATCGAGAC
GTTTTTAAAG CGGTGGAATG GTACACGCGC GGTGCCAAAC TTGGCCATGT GCCCGCCTTA
CATAACTTGG GCAACCACTA CCGCCATGGG TTGGGGGTGG CCGTCGATGC CCGACTGGCA
AGGCACTATT TTGAAAAAGC GCAGGCCGCC GGCTTTATGC CGTCTAAATT AGCCCTCGGT
GAGATGCTGG AGAAGGGTGA AGGCGGGGTG GCCTCCCTTA AACGGGCAGA AGGGCTGTTT
GGTGAGGTGG CCCGGTCGGG CAATATGGAT GGTAAATACC GGCTTGCCCG ACTCTACTTA
ACCCATGGCC CAGAGGGTAA ACAAGTTTAT GCCATGCGTC TGCTCCAACA GACGGCTAAA
TTGGGGCATC CCGCAGCGCA GTATGGTTTA GCGGCCCTCT ACCTAAAAGA GGCCGATCTT
GAAGCCCCGT TGACGGATCG GGTTAAACAG GCTTATTCAC TGCTGTTGGC CAGCCGCCAC
GGCGGTATGA GCGAAGCCGA ATCCCTGCTA GAGCGGCTGG AAAAACATTT GCCTGAAGGC
GTGCGTCAAG AACTACAGCA CGCTTTTGAA AAAACGAAGG CAAAGCTGTA G
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| Protein sequence | MVKCRHSRVG VSRRAALFLA LIVVMSSGLS AGLAAPNLAE DVLLAGPQRT ALWPHGVALP
TDRGSLLQLA NQGYRRAQFF MGLYLDYGIG GEAQPFEAFQ WYSRAAGQGS RWAWIKLGDL
YFRGRGTARD AKKALQWYLH AGENGEPSGY LAAAMVQIRG TGDSIDWPTV LQRVHKAVQA
GVLEGHTALC LLGVRHVVAT QLPPEQTRQQ CQMSADGGQP FAAILMAQWL AEQHNENNPQ
LQKQVEQWYE RAAAMEVGNL AVLPEAPLVM AEHFPVVWIE ALEPLVSANR ASVPRAAYRA
GVALLKSGQG FVARSRGVRW LQKGAELGDA NAQFRLGLAY AQGEGVVVNP ERAIYWYTLA
SEQGEVSAQF NLALLYYQGR LVEQDFTKAR FWFEHASEQG DVQARDHLGD IYRHGRGIPV
NIAEAMKWYR HAAEQKNVYA LTSMGDIYQA GEGVAEDAAE AAKWYRKAAL LGHAPAQGNL
ADLYRQGKGV EKDLNQAAQW YTKAAEQGDM VSQNWLGTLY LDGDGVEKNP QLAQQWYEKS
AAQGYAFAQN NLAVMLRDGL AGKADYKRAR QLFLLAARQN SGDAQNSLGV LYEKGLGGET
DPIEAAAWYR KAIQYGNDSA RYNLGMLYYA NRQFGSIEEA LRLLQDAQSA GVAQAQTALA
RIYLSKENSH YNPELGERFL REAAEQGGAD AQALLGVLLT FKTPLKQDYE QALRWLKKGA
EGGSPEAQFH LGYMLHLGVG LAPNAHRAVH WYRKAAEQGF AEAANNLGTL YFQGNGVDRD
VFKAVEWYTR GAKLGHVPAL HNLGNHYRHG LGVAVDARLA RHYFEKAQAA GFMPSKLALG
EMLEKGEGGV ASLKRAEGLF GEVARSGNMD GKYRLARLYL THGPEGKQVY AMRLLQQTAK
LGHPAAQYGL AALYLKEADL EAPLTDRVKQ AYSLLLASRH GGMSEAESLL ERLEKHLPEG
VRQELQHAFE KTKAKL
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