| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1484 |
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| Symbol | |
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| ID | 4483097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1814008 |
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| End bp | 1815675 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722226 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_865399 |
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| Protein GI | 117924782 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0158649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGATA AACAGCTTGC CTTTCACAAA AAAATGGCCC ATTTGCGCAG CTCCTTTTTA
CGCGGGCTGC CTGAACGTTT GGAACGGGGG CGTGTTTTGT TGCAAGGGGT ACACAGTGGC
GAAGGATTAT CGGCGGTCAA AGAGCTGCAC TTGCTGTTTC ACTCCATCAA GGGCACCAGT
GCATCGTTTC AACTGTATGA GATCAATCTT TCGGCCAAAG CGGCCGAAGC GATGTTGATG
ATCGCGCTGG AGCATAAGAA GCTACCCGAG TCTGCCCAAC TGGAGCTGCT CACGCAACAG
TTGGAGAACA TTGTAAATAT GGCGGATGCA ACCACGTTGG CTTATAGCAC CCCCCCCTGT
TTTGAGCTCC CCAAACAGGC GCCCGATGCA AGCAATGTCG CCAATATTGC CAGTGAGAGT
GAGATCTATA TTTGTGATGA TGACCCGATT TTACTGGCGC AATTGGTTTC GCAATTGGCC
TGTTTTGGCT ACCATGCCAG CGCGTTCCAC ACCCTGGATG ATCTGGAGCA GGCGGTGCGT
CAGCGGCTAC CCAGCGCATT GGTGATGGAT GTGGTGTTTC CCGAGGGGAA AGAGGCCGGC
TTGGAGCGGG TGGAGAGCCT TAAAACCTAT CTGAATGGGC ATGTGCCCAT TGTGTTTATC
TCATCGCGCA ATGATTTTGA GTCACGCATG CGGGCGGTTC AGGCGGGGGG GCGTGCCTAC
TGTCACAAAC CGATTCGCTC CACCGAGCTG TTGGATGTAC TGGATGGGTT AACCATGACC
CACCCTCCGG AACCCTTTCA TATTTTGGTG GTGGATGATG AACCCGATAC GGCCAACTAT
CACGCCTTGG TGTTGCAAGA GGCGGGCATG TTGACGCGAA TCGTCTCTGA TCCGGCCCAT
GTGCTGGAGG CGCTGACGGG CTTTAATGCC GATCTGGTGC TGATGGATAT GTATCTGCCC
CAGTGTAGCG GGGCCGAGTT GGCGACTTTG TTGCGGCAGA CCCCAGGTTA TTTAAGTTTG
CCCATTGTGT TTCTATCGAG CGAGACCAAT ACGGGCCGCC AGTACCAAGC GATGAAGGTC
GGAGTAGATG GTTTTTTAAA CAAGCCAATT CAGGCAGATA CTCTGATTGC CGAGGTGTCT
ATGCGGGCCG AGCGGATGCG CACTTTACGT TCGCTGATGA TCCGCGACAG CTTGACCGGC
TTGTATAACC ACACCACCAC CAAGCATTTT TTGGATTCGG AAATTGCCAG CGCCTCACGG
CGGAACAGTA CCACCTGTTT TGCCATGATT GATTTAGACT ATTTCAAAAA AGTGAACGAT
ACCTATGGCC ATGCCATGGG GGATCAAGTG TTGGTGGCTC TCTCTAGGCT GTTGCAGCAG
CGGGTACGTC AATCGGATGT GGTGGGACGC TACGGTGGTG AGGAGTTTGC GGTGGTCCTG
ACGGATATTG ATCTGGAGCG TGCTAAGGCC ATTCTGGATC AGCTGCGGGA GGATTTTGCG
CGGGTTAAGT TTTTTGCGAA TGGAATTGAG TTTACATGCA GCTTTAGCTG TGGTGTTGCC
GCTTTCCCAC GCTTAGAGAC GGCTTTGGAA ATTGGGGAGG CTGCGGATAA AGCGCTCTAT
CAAGCCAAAC GTGAAGGGCG GAATCAGGTG GTTGCTTTTC AATCTTAA
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| Protein sequence | MHDKQLAFHK KMAHLRSSFL RGLPERLERG RVLLQGVHSG EGLSAVKELH LLFHSIKGTS
ASFQLYEINL SAKAAEAMLM IALEHKKLPE SAQLELLTQQ LENIVNMADA TTLAYSTPPC
FELPKQAPDA SNVANIASES EIYICDDDPI LLAQLVSQLA CFGYHASAFH TLDDLEQAVR
QRLPSALVMD VVFPEGKEAG LERVESLKTY LNGHVPIVFI SSRNDFESRM RAVQAGGRAY
CHKPIRSTEL LDVLDGLTMT HPPEPFHILV VDDEPDTANY HALVLQEAGM LTRIVSDPAH
VLEALTGFNA DLVLMDMYLP QCSGAELATL LRQTPGYLSL PIVFLSSETN TGRQYQAMKV
GVDGFLNKPI QADTLIAEVS MRAERMRTLR SLMIRDSLTG LYNHTTTKHF LDSEIASASR
RNSTTCFAMI DLDYFKKVND TYGHAMGDQV LVALSRLLQQ RVRQSDVVGR YGGEEFAVVL
TDIDLERAKA ILDQLREDFA RVKFFANGIE FTCSFSCGVA AFPRLETALE IGEAADKALY
QAKREGRNQV VAFQS
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