Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1474 |
Symbol | |
ID | 4483086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1798937 |
End bp | 1801726 |
Gene Length | 2790 bp |
Protein Length | 929 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639722215 |
Product | valyl-tRNA synthetase |
Protein accession | YP_865389 |
Protein GI | 117924772 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0304029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.195737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAA CATCGTTGCC AAAATCCTAT GACCCCACCG GTGTGGAACA GCGCTGGTAT CAAACCTGGG AAGAGCAGGG GTGTTTTAAA CCCAGTGGTC TAAGTGCGGC CAACGCCTAC TGCATCATGA TCCCCCCCCC CAATGTGACC GGCAGCCTGC ATATGGGGCA CGCTTTTCAA GATACCATCA TGGATGCCCT GATCCGCTAC AACCGCATGC AGGGGCATAA TACCCTGTGG CAGTGTGGGA CCGATCATGC CGGCATCGCC ACCCAAATGG TGGTGGAACG GCAACTCGAA GCCGAGGGTA AAAGCCGCCA CGATCTTGGC CGCGATGCCT TTATTGAACG GGTTTGGGAG TGGAAAGCCA GCAGTGGTAA CACCATTACC AAACAGCTCC GCCGAATGGG GGCTTCCTGC GATTGGAGCC GTGAACGCTT TACCATGGAT GACGGACTCT CCGAGGCGGT CAAAGAGGTG TTTGTTCGCC TCTATGAAGA AGATTTAATC TACCGTGGTA AGCGCTTGGT CAACTGGGAC CCGGTGTTGC ACACGGCGGT TTCGGATCTG GAAGTAATCA GCGAGGAAGA GCAGGGCCAC ATGTGGCACA TGCGCTACCC CATGGTCGAG GGCGATGGCT TTTTGGTGGT GGCAACCACT CGACCAGAAA CCATGCTGGG GGATAGCGCC GTGGCGGTGC ATCCCGAAGA CGCGCGCTAC CAGCATCTGA TCGGCAAGCA GGTGGTGTTG CCCTTGACGG GTCGCACCAT TCCTGTGATC GGGGATGACT ATGTTGATCC TGAGTTTGGT TCTGGCTGTG TCAAGATCAC ACCAGCCCAC GATTTTAATG ACTATGAGGT AGGCAAACGG CACAATCTGC CCCAAATGAG CATCTTTACC GTGGATGCCT GCATCAATGA GGATGCCCCA GCCCGCTACC GGGGAATGGA TCGCTACGAG GCGCGTAAAC GCATTGTGGA GGATCTGCAA GAGGCAGGTT TGCTGGAAAA AATAGTCGAC CACAAACTCA TGGTGCCCCG TGGTGACCGT ACCAAGGCAG TCATTGAGCC GTTGTTGACC GATCAATGGT TTGTGACCAC CGCCCCCTTG GCCGCTGAGG CGATTAAGGT GGTGGAAGAG GGGCGCATTA AATTTGTACC GGAAAACTGG TCCAAAACCT ATTTTGAATG GATGCGGAAT ATTCAAGATT GGTGCATCAG TCGCCAGATA TGGTGGGGCC ACCGCATTCC CGCTTGGTAT GGTCCCGATG GTCAGGTGTT TGTCTGCCGC ACCCAAGAGG AAGCGTCCCA AAAAGCCAGC CAGCACTACG GTAAGCCGGT GGCGCTAACC CAAGATAATG ATGTGCTGGA TACCTGGTTC TCATCGGCAC TATGGACCTT TTCGACCCTG GGTTGGCCAG AAAAAAGCCA AGAATTGGCC TCTTTTCACC CCACAAACGT GCTGGTTACA GGTTTTGACA TTATCTTTTT TTGGGTAGCC CGCATGATTA TGATGGGGCT GAAATTTACC GATGAAGTGC CCTTTCATAC CGTCTATGTG CATGGTCTGG TGCGCGATGG CGAGGGGCAT AAAATGAGCA AATCCAAGGG TAATGTCTTG GACCCGTTGG ATCTGATCGA CGGTATTAGC TTGGAGGATC TGGTGGCCAA GCGTACGCGG GATATGATGC AGCCCCATCT GGCCAAAAAG ATTGAAAAAC AGACCCGTAA AGAGTTCCCC GATGGCATCG CCGCCGCAGG TACGGATGCC TTGCGCTTTA CCTTGGCATC GTTGGCGACC CAGGGGCGGG ATATCAAGTT TGACCTGGGA CGGATGGAGG GCTACCGTAA TTTTTGCAAT AAGTTATGGA ATGCCTCGCG CTTTGTGCTC ATGAATGCAG AGGGCCAGGA TTGCGGGCTG GAACGGGTGG ATCTGCCCCT ATCGGTGACC GATCAGTGGA TTGTGAGCAA ATTTCAGCGC ACCGCCCGGG ATGTTACACA GGATATTGAA AATTATCGCT TTAGCGATGC GGCCAATACG CTCTATCAAT TTTTGTGGGG CAGTTATTGC GACTGGTACT TAGAGATGGT GAAAACCACG CTCTATGATG AGAACGCCGC AGAGGCGGCC AAAGCGGCGG TACGGCACAC CATGGTTGGG GTGTTGGAGG CCTCCTTGCG GCTGCTCCAT CCGTTGATGC CCTTTATTAC CGAAGAGTTG TGGCAAAAGC TGGCCCCTCT GGCGGGCAAG CCCGCAGGTA GCATTATGCT GGCCCCTTGG CCCGAGGCCG ATGAAGGCCG TATTTTAGAC CAAATTGAGA GCGAAATTGA CTGGGTGCAG CGCTTTACCA GCACCATTCG TGGTATCCGT AGTGAAATGG ATATCCCTCC CAGCAAAAAG ATCCAGGTCT TGGTGCGTGG TGACGACAGT GCGGTGGCCC GTCTGCGGCG CCATGTGAGT ACCGTTACCG CCCTGGCCAA ATTGGAGGGG TGGGCGGTGT TGCAGGATGA GGCTCCGCAA GGCTGCGCCA CGGGGGTGTT GGAGGATATG CAGCTGTATA TCCCCATGAA GGGCCTCATT GATGTGGCCG CCGAGAGCGC CCGTTTGCAA AAAAGCTTGG ATAAGCTGGA TGCCGATTGG CAGCAAGTCA CAAGAAAACT GAGCAACGAA AATTTTATTG CCAAGGCCAA TCCCGAAGTG GTTGCCAAAG AGCGGGATAA AGCCAATGAA CTGATGGAAA AAAAGCGTGC CGTGCAGGAG GCTCTAACAC GCATTCAGGC CATGGCATAG
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Protein sequence | MQETSLPKSY DPTGVEQRWY QTWEEQGCFK PSGLSAANAY CIMIPPPNVT GSLHMGHAFQ DTIMDALIRY NRMQGHNTLW QCGTDHAGIA TQMVVERQLE AEGKSRHDLG RDAFIERVWE WKASSGNTIT KQLRRMGASC DWSRERFTMD DGLSEAVKEV FVRLYEEDLI YRGKRLVNWD PVLHTAVSDL EVISEEEQGH MWHMRYPMVE GDGFLVVATT RPETMLGDSA VAVHPEDARY QHLIGKQVVL PLTGRTIPVI GDDYVDPEFG SGCVKITPAH DFNDYEVGKR HNLPQMSIFT VDACINEDAP ARYRGMDRYE ARKRIVEDLQ EAGLLEKIVD HKLMVPRGDR TKAVIEPLLT DQWFVTTAPL AAEAIKVVEE GRIKFVPENW SKTYFEWMRN IQDWCISRQI WWGHRIPAWY GPDGQVFVCR TQEEASQKAS QHYGKPVALT QDNDVLDTWF SSALWTFSTL GWPEKSQELA SFHPTNVLVT GFDIIFFWVA RMIMMGLKFT DEVPFHTVYV HGLVRDGEGH KMSKSKGNVL DPLDLIDGIS LEDLVAKRTR DMMQPHLAKK IEKQTRKEFP DGIAAAGTDA LRFTLASLAT QGRDIKFDLG RMEGYRNFCN KLWNASRFVL MNAEGQDCGL ERVDLPLSVT DQWIVSKFQR TARDVTQDIE NYRFSDAANT LYQFLWGSYC DWYLEMVKTT LYDENAAEAA KAAVRHTMVG VLEASLRLLH PLMPFITEEL WQKLAPLAGK PAGSIMLAPW PEADEGRILD QIESEIDWVQ RFTSTIRGIR SEMDIPPSKK IQVLVRGDDS AVARLRRHVS TVTALAKLEG WAVLQDEAPQ GCATGVLEDM QLYIPMKGLI DVAAESARLQ KSLDKLDADW QQVTRKLSNE NFIAKANPEV VAKERDKANE LMEKKRAVQE ALTRIQAMA
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