| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1398 |
|---|
| Symbol | |
|---|
| ID | 4481817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1698874 |
|---|
| End bp | 1699335 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639722141 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_865315 |
|---|
| Protein GI | 117924698 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGGC GAAAAAGGAT GGAACAAGGG GGGAGCCACA AAAACAAGGA TGCAGAAAAG
CCCCTCTTAT TGGTCTCGGC TGCGCTGATC ATGCAAGAGA ATCGGGTGCT GTTGACCCAG
CGTAAGCGTG GGGGGCACTT GGCGCTGCAC TGGGAGTTCC CGGGGGGCAA GTTGCATCCG
GGTGAAAGCC CCGAACAGGC CCTGGTACGG GAGATTGAAG AGGAAGTGGG GCTACAGATC
GAGGCGCTCA CTCCGTGGGC CTTCGTTTCC CATGATTATG GCACCTTTCA TCTGCTTATG
CCGCTGTTTC GGGTAGGCCG TTTTTACGGC ACTCCACAGG CGTTGGATGT GCATGCGGTA
GCGTGGTTTG AACTGCCCAG CTTGCGCCAA CTGACGTTTC CCCCTGCGGA CCTACCCTTG
CTTGCGCAAC TGTTTGCCGA ACAGGGGTTG ACTTACCCTT AG
|
|---|
| Protein sequence | MNGRKRMEQG GSHKNKDAEK PLLLVSAALI MQENRVLLTQ RKRGGHLALH WEFPGGKLHP
GESPEQALVR EIEEEVGLQI EALTPWAFVS HDYGTFHLLM PLFRVGRFYG TPQALDVHAV
AWFELPSLRQ LTFPPADLPL LAQLFAEQGL TYP
|
|---|
| |