Gene Mmc1_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1388 
Symbol 
ID4481807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1687889 
End bp1689760 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content57% 
IMG OID639722131 
ProductABC transporter related 
Protein accessionYP_865305 
Protein GI117924688 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0285354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTC TGGATCTGAA AAAGATTCGC TTGGGCTACG GTGGCCCGCT TCTGCTTGAC 
GGCGTGGATT TTACCATTGA ATCGGGCGAA CGGGTATGTT TGGTCGGTCG CAATGGTAGC
GGCAAAACCA CCCTGTTTAA AGTCGTGGCG GGGGAGGTAC TACCCGATGA TGGCGAGGTC
GCCTTGGCGA AGGGCTTAAA GGTGGCCCGC ATGATCCAAG ATGTGCCCGG TGCCCTGGAG
GGCAGCGTAT TTGACATTGT GGCCCAGGGG CTGGGGGAAA CCGGCGAACT GATTGCCCGC
TACCACCACG CCATGCTGTC GGGAGATGTC GAGGCCATGC ACACACTGCA TGACCAACTG
GATGCCACCC CTCAGGGGTG GAATGGTCAA CAGCAGATTG AATCGGCCCT CTCCCGGCTC
AATCTGGATG GCGATCAGCT ATTTGCCAAC CTCTCGGGCG GGCTCAAACG GCGCGCCTTG
ATGGCCCGTG CGGTGGTCTC TCAACCCGAT TTACTGCTGC TGGATGAGCC CACCAACCAC
CTAGATATTC CCTCCATTGA GTGGTTAGAA AGCTTTTTAA AAAGCTACCG GGGCACCCTG
CTGTTTATTA CCCACGACCG CCGCTTTTTA CGCGCCTTAG CGACCCGCAT TGTGGAGCTG
GACCGTGGCC AACTGACCAG TTGGCCTGGG AATTATGATG CCTACCTACA GGGCAAGGCC
GATCTGCTGC TGGTCGAAGA GAAACAGAAC GCCCGCTTTG ATAAAAAGTT GGCCCAAGAG
GAGGCGTGGA TTCGTCAGGG CATAAAAGCC CGGCGCACCC GCAATGAGGG TCGTGTACGG
GCGCTGCAAG CGCTGCGTTT AGAGCGCCGC GCCCGGCGTG AGCTCTCCGG TAGCGCCAAA
ATCTCCATTC AGGAGGCCTC CCGTTCCGGT CGTCTGGTGG TGGAGTGCGA TAAGGTTGGC
TTTAGCTATG CCGATACCCC TTACATCCGG GATCTTACCA CCACCCTTAT CCGTGGCGAT
AAAGTGGGCA TTGTGGGGCC CAATGGCTGT GGTAAAACCA CCCTACTTAA TCTGCTATTG
GGCAAATTAA AGCCCCAAAG CGGTGAGCTC AAACTGGGTA CCCGCTTGGA GATTGCCTAT
TTTGACCAGC ATCGCGCCAG TCTAGACCCC AATGCTACGG TGCAGGATAG CGTTGCCAAT
GGTCGTGATC GCCTTGATGT GAACGGAGAA AATCGCCATG TTATCGGCTA TTTACAAGAT
TTTCTCTTTT CCCCAGAGCG GGCCCGCTCA CCGGTTTCTG TGCTGTCGGG TGGGGAGCGC
AATCGACTGC TGCTGGCCAA ACTGTTTGCC CAGCCCGCCA ACATGTTGGT ATTGGACGAG
CCGACCAATG ATCTGGATGC CGAAACTCTG GAGTTGTTAG AGTCCCACGT GGTCAATTTT
AATGGCACTG TATTGGTGGT GAGCCATGAT CGGGAGTTCC TTAACAATGT GGTCTCCTCC
ACCCTCGTAT TTGAAGGGGA TGCCTTGGTT AAGGAGTACC CAGGCGGCTA TGATGACTGG
TTAGAACAGC GCCCTGCCGT CGCCGTGGAG AGCAAACCCA GCCTCAAGCC CGCCTCGCCG
CAAAAGAGCA CCAAAAAGGC GGTTAAGCTC ACCTATAAAG ATCAACGGGC ATTGGAGACC
TTGCCTGCCG AGATTGAGCA GTTGGAAGGG GAAAAAGCGG CATTAGAGGC GCTGCTTGCC
GACCCGGCCA TGCATCTGCG GGAAAACGTG GAGCAGGCCA ATCAAGCCAC CGAGCGGTTG
GCCAAGCTGG AGGCAGAATT GGAAGATAAA TATCACCGCT GGGATGTGCT GGAGTCCAAG
GCGGCGGGCT GA
 
Protein sequence
MALLDLKKIR LGYGGPLLLD GVDFTIESGE RVCLVGRNGS GKTTLFKVVA GEVLPDDGEV 
ALAKGLKVAR MIQDVPGALE GSVFDIVAQG LGETGELIAR YHHAMLSGDV EAMHTLHDQL
DATPQGWNGQ QQIESALSRL NLDGDQLFAN LSGGLKRRAL MARAVVSQPD LLLLDEPTNH
LDIPSIEWLE SFLKSYRGTL LFITHDRRFL RALATRIVEL DRGQLTSWPG NYDAYLQGKA
DLLLVEEKQN ARFDKKLAQE EAWIRQGIKA RRTRNEGRVR ALQALRLERR ARRELSGSAK
ISIQEASRSG RLVVECDKVG FSYADTPYIR DLTTTLIRGD KVGIVGPNGC GKTTLLNLLL
GKLKPQSGEL KLGTRLEIAY FDQHRASLDP NATVQDSVAN GRDRLDVNGE NRHVIGYLQD
FLFSPERARS PVSVLSGGER NRLLLAKLFA QPANMLVLDE PTNDLDAETL ELLESHVVNF
NGTVLVVSHD REFLNNVVSS TLVFEGDALV KEYPGGYDDW LEQRPAVAVE SKPSLKPASP
QKSTKKAVKL TYKDQRALET LPAEIEQLEG EKAALEALLA DPAMHLRENV EQANQATERL
AKLEAELEDK YHRWDVLESK AAG