Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1388 |
Symbol | |
ID | 4481807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1687889 |
End bp | 1689760 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639722131 |
Product | ABC transporter related |
Protein accession | YP_865305 |
Protein GI | 117924688 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0285354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTC TGGATCTGAA AAAGATTCGC TTGGGCTACG GTGGCCCGCT TCTGCTTGAC GGCGTGGATT TTACCATTGA ATCGGGCGAA CGGGTATGTT TGGTCGGTCG CAATGGTAGC GGCAAAACCA CCCTGTTTAA AGTCGTGGCG GGGGAGGTAC TACCCGATGA TGGCGAGGTC GCCTTGGCGA AGGGCTTAAA GGTGGCCCGC ATGATCCAAG ATGTGCCCGG TGCCCTGGAG GGCAGCGTAT TTGACATTGT GGCCCAGGGG CTGGGGGAAA CCGGCGAACT GATTGCCCGC TACCACCACG CCATGCTGTC GGGAGATGTC GAGGCCATGC ACACACTGCA TGACCAACTG GATGCCACCC CTCAGGGGTG GAATGGTCAA CAGCAGATTG AATCGGCCCT CTCCCGGCTC AATCTGGATG GCGATCAGCT ATTTGCCAAC CTCTCGGGCG GGCTCAAACG GCGCGCCTTG ATGGCCCGTG CGGTGGTCTC TCAACCCGAT TTACTGCTGC TGGATGAGCC CACCAACCAC CTAGATATTC CCTCCATTGA GTGGTTAGAA AGCTTTTTAA AAAGCTACCG GGGCACCCTG CTGTTTATTA CCCACGACCG CCGCTTTTTA CGCGCCTTAG CGACCCGCAT TGTGGAGCTG GACCGTGGCC AACTGACCAG TTGGCCTGGG AATTATGATG CCTACCTACA GGGCAAGGCC GATCTGCTGC TGGTCGAAGA GAAACAGAAC GCCCGCTTTG ATAAAAAGTT GGCCCAAGAG GAGGCGTGGA TTCGTCAGGG CATAAAAGCC CGGCGCACCC GCAATGAGGG TCGTGTACGG GCGCTGCAAG CGCTGCGTTT AGAGCGCCGC GCCCGGCGTG AGCTCTCCGG TAGCGCCAAA ATCTCCATTC AGGAGGCCTC CCGTTCCGGT CGTCTGGTGG TGGAGTGCGA TAAGGTTGGC TTTAGCTATG CCGATACCCC TTACATCCGG GATCTTACCA CCACCCTTAT CCGTGGCGAT AAAGTGGGCA TTGTGGGGCC CAATGGCTGT GGTAAAACCA CCCTACTTAA TCTGCTATTG GGCAAATTAA AGCCCCAAAG CGGTGAGCTC AAACTGGGTA CCCGCTTGGA GATTGCCTAT TTTGACCAGC ATCGCGCCAG TCTAGACCCC AATGCTACGG TGCAGGATAG CGTTGCCAAT GGTCGTGATC GCCTTGATGT GAACGGAGAA AATCGCCATG TTATCGGCTA TTTACAAGAT TTTCTCTTTT CCCCAGAGCG GGCCCGCTCA CCGGTTTCTG TGCTGTCGGG TGGGGAGCGC AATCGACTGC TGCTGGCCAA ACTGTTTGCC CAGCCCGCCA ACATGTTGGT ATTGGACGAG CCGACCAATG ATCTGGATGC CGAAACTCTG GAGTTGTTAG AGTCCCACGT GGTCAATTTT AATGGCACTG TATTGGTGGT GAGCCATGAT CGGGAGTTCC TTAACAATGT GGTCTCCTCC ACCCTCGTAT TTGAAGGGGA TGCCTTGGTT AAGGAGTACC CAGGCGGCTA TGATGACTGG TTAGAACAGC GCCCTGCCGT CGCCGTGGAG AGCAAACCCA GCCTCAAGCC CGCCTCGCCG CAAAAGAGCA CCAAAAAGGC GGTTAAGCTC ACCTATAAAG ATCAACGGGC ATTGGAGACC TTGCCTGCCG AGATTGAGCA GTTGGAAGGG GAAAAAGCGG CATTAGAGGC GCTGCTTGCC GACCCGGCCA TGCATCTGCG GGAAAACGTG GAGCAGGCCA ATCAAGCCAC CGAGCGGTTG GCCAAGCTGG AGGCAGAATT GGAAGATAAA TATCACCGCT GGGATGTGCT GGAGTCCAAG GCGGCGGGCT GA
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Protein sequence | MALLDLKKIR LGYGGPLLLD GVDFTIESGE RVCLVGRNGS GKTTLFKVVA GEVLPDDGEV ALAKGLKVAR MIQDVPGALE GSVFDIVAQG LGETGELIAR YHHAMLSGDV EAMHTLHDQL DATPQGWNGQ QQIESALSRL NLDGDQLFAN LSGGLKRRAL MARAVVSQPD LLLLDEPTNH LDIPSIEWLE SFLKSYRGTL LFITHDRRFL RALATRIVEL DRGQLTSWPG NYDAYLQGKA DLLLVEEKQN ARFDKKLAQE EAWIRQGIKA RRTRNEGRVR ALQALRLERR ARRELSGSAK ISIQEASRSG RLVVECDKVG FSYADTPYIR DLTTTLIRGD KVGIVGPNGC GKTTLLNLLL GKLKPQSGEL KLGTRLEIAY FDQHRASLDP NATVQDSVAN GRDRLDVNGE NRHVIGYLQD FLFSPERARS PVSVLSGGER NRLLLAKLFA QPANMLVLDE PTNDLDAETL ELLESHVVNF NGTVLVVSHD REFLNNVVSS TLVFEGDALV KEYPGGYDDW LEQRPAVAVE SKPSLKPASP QKSTKKAVKL TYKDQRALET LPAEIEQLEG EKAALEALLA DPAMHLRENV EQANQATERL AKLEAELEDK YHRWDVLESK AAG
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