| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1284 |
|---|
| Symbol | |
|---|
| ID | 4480597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1576747 |
|---|
| End bp | 1577652 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639722027 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865201 |
|---|
| Protein GI | 117924584 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.218684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA AGCCAGAAAA GAGAAAAGCC AAGTCCGGCA AGGAGTTACG CTGGGGCGTG
GAACGCAGAA TGGAATTCAT CGAATTCCGC CTCTTCTGGG AGGGGAAGAT CAATCGGAGA
GATCTGATTG AGAAGTTCGG TGTGTCCACC CCCCAAGCCT CTGCTGATTT GGGCAAATAT
CAGGAAGCTG CACCGGAAAA TATCCACTAC GATATCCGGG CGAAATGCTA TTACCCGGAT
AAGGGCTTCA AGCCTAAGTT TCTGGACCCG GACTCCGATC GCTATCTGGC CAACCTTCTC
TCGCTATCCA GTGGGATCAT GACTGAGGAG GAGAGCTGGC TTTATAGCGT CCCCTCCTAT
GGTGTGTTGC CCCAACCGCA TCGAGGGATT GATCCTGGCC GCCTTCGCAG AGTCGTAGGA
GCTATCCGGG AGAAGTTGGC CGTTCAGATC CGCTATCAAT CCATGAATGC GCCTGAGCCC
GAATGGCGTT GGATTACCCC TCATGCACTG GCTTTCGATG GCTACAGGTG GCATGTACGG
GCATGGTGCC ATCGTGGCGA AGCGTTCAAG GACTTTGTGT TAGCGCGGAT TGTCAGCATC
CGTCTGACCA AGGGACATGA TCTTGATCCG ACCGAGGATG TGGAGTGGCA AGAGTTCATT
GATGTGCGCA TCGGGCCGCA TCCCAAGCTG ACCGACACAC AGCGGACAGC CATCGAACTG
GACTATGGCA TGGAGGATGG AGAGTTGGTA ATTCCTGTTC GGCGTGGATT CCTCTTCTAC
TTCCTGAAGC GCATGGGTCT GGATATCGAT CCCAACGTGC GCCAGCCAAA GCATCAGCAG
ATTGTCCTGC TCAACCAGGA AGAGGTGGAA AAAGCCTATA GCCTCTCCGA GGAGGGCCAT
TCGTGA
|
|---|
| Protein sequence | MTKKPEKRKA KSGKELRWGV ERRMEFIEFR LFWEGKINRR DLIEKFGVST PQASADLGKY
QEAAPENIHY DIRAKCYYPD KGFKPKFLDP DSDRYLANLL SLSSGIMTEE ESWLYSVPSY
GVLPQPHRGI DPGRLRRVVG AIREKLAVQI RYQSMNAPEP EWRWITPHAL AFDGYRWHVR
AWCHRGEAFK DFVLARIVSI RLTKGHDLDP TEDVEWQEFI DVRIGPHPKL TDTQRTAIEL
DYGMEDGELV IPVRRGFLFY FLKRMGLDID PNVRQPKHQQ IVLLNQEEVE KAYSLSEEGH
S
|
|---|
| |