Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1261 |
Symbol | |
ID | 4481856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1553935 |
End bp | 1555191 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639722004 |
Product | serine peptidase |
Protein accession | YP_865178 |
Protein GI | 117924561 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.361158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGACC GTGCCCGCTT GGAAACCATC CTCTCGGTGA TTGCTCCCCG CGTCGGCTTG GAGCAATCTG CCATGCCCAG CGGCTTTGAG CCCAAGGATC ATAGCTCTGA CCTGCTCATC ACGCCGAATG GGATTGCCGT CGTGCCCATC CACGGCACCC TGGTGAAACG GGCGGGAGCC ATTGAGGCCG CTTCTGGACT TACATCCTAC GCATCCATCG AGGAGAAGAT CCTGGATGCG GCTACCGACC CAGCAGTCAG GGCCATCCTG ATGGATGTCG ATTCCCCTGG TGGAGAGGTG GGTGGGGTGT TCGATCTGGC TGCCATGATT CAGGAGGCGG GGCAGGACAA GCCCATATGG GCGCTGGCCG ATGATGCTTT TTCCGCCGCT TATCTCATCG CCTCCCAGGC TCACCGGATC ATCGTGCCCC AGACTGCAGG GGTGGGCTCC ATCGGCGTCA TCGCTGCCCA TGTGGATGAA TCAGAGAAGG ATGCCAAAGA GGGGCGCAGC TACACCACCG TGTTTGCTGG AGCCCGTAAA AATGACTTTT CCACCCACGC CCCTCTCTCT CTAGAGGCTC GGACTAACCT GCAACTGGAG GTAGATCGGC TCTACGGTAT GTTCGTCGCT GCCGTGGCGG CAGGTCGCAA GATGAATGAA TCGGCGGTGC GTGCCACCGA GGCAGGCCTG TTCTTTGGCG ACAAGGCAAT CCGGGTTGGT CTGGCTGACC AGGTTGGCAC CATCCGGGAT GCCCTGGCTG GCCTGTCAAT AACTATTGAT GCGTCCAAAA AGACCTATTC TCACCGAGCG GCACTGCCGC GGGAACCTGT GTATATGGAG GAAACCATGC CCATGGAAGA AAATCCGGCG GCTGAAACAT CTGTTGTCAC GTCACGACAA TCCCAACCTG ACCTTCACGC CAAATCCGAC ATAATGTCGG ATTTGACTGA CCAATCTGCG GTATCCAACG TTGTGGACCT GGACAAGGTC CGTGCCGAGC ATGGCAAACA GATGCGCAAT GAAGCTCAGG CCATTGTGGA TCTATGTGCC CTGGCGGATA TGCCCCACTT AGCCGGTGGC TATATCGCCG AAGGAACCTC CGCTGAAGTG GTGCGCAAAG AGCTACTAGC CAAACGGGCC GATGCTGAGG AGATCCACTC CGAGGTGATG CCTGGAGATG GCACCCGTAT GCAGCCCAGA CAGAGTCTTG AAACCAACCC GGTTGTGGCC TCCTGCCGCA AACTCGCCGG TCAATAA
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Protein sequence | MVDRARLETI LSVIAPRVGL EQSAMPSGFE PKDHSSDLLI TPNGIAVVPI HGTLVKRAGA IEAASGLTSY ASIEEKILDA ATDPAVRAIL MDVDSPGGEV GGVFDLAAMI QEAGQDKPIW ALADDAFSAA YLIASQAHRI IVPQTAGVGS IGVIAAHVDE SEKDAKEGRS YTTVFAGARK NDFSTHAPLS LEARTNLQLE VDRLYGMFVA AVAAGRKMNE SAVRATEAGL FFGDKAIRVG LADQVGTIRD ALAGLSITID ASKKTYSHRA ALPREPVYME ETMPMEENPA AETSVVTSRQ SQPDLHAKSD IMSDLTDQSA VSNVVDLDKV RAEHGKQMRN EAQAIVDLCA LADMPHLAGG YIAEGTSAEV VRKELLAKRA DAEEIHSEVM PGDGTRMQPR QSLETNPVVA SCRKLAGQ
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