| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1239 |
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| Symbol | |
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| ID | 4484119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1538953 |
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| End bp | 1541091 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721982 |
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| Product | TOPRIM domain-containing protein |
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| Protein accession | YP_865156 |
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| Protein GI | 117924539 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0951779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATG GGGCTCCATA TCTCGATTTC AATGATGCCG GTGGGCAGCA GGAGTTTTCC
TCTGTTGCAG AACAGCATCA TGAAAAGGAG GAGATCAAGG CACGTCTGCA GAGCCAGATT
GAGTCGGTGC TGTATCACCT TCTGCCTGCC GGGAAGGTTC GTCATGGGCA GTTCTTCATC
GGCGATGTGG AGGGCAACCC CGGTGAAAGT ATGAAGGTAG AACTGACCGG CGAAAAGGCT
GGGGTCTGGT ACGACCATGC CGCAGGTTCG GGTGGCGACA TCCTGGACCT GTGGGCCCGG
TCACGAGGCA TGGACACCCG CACCCAGTTC CGTGACGTCA TGGATGATGT GCGCGGCTGG
CTGGGAGAGT CCGTGAGATT ACCACCTGTT TCGATGCAAC CAACTCAACG GCGTGAACCC
CCCATGGATG AGCTGGGGCC CCATACCGGT AAGTGGGACT ATTTCGATAC CAATGGCCAA
CTACTGGTCT GTGTCTACCG TTACGATCCT CCGGGCCGCC GAAAGCAGTT CCGCCCTCTG
GATGTGCGCA CCGGCAAGTG GCAGTCGCCA GCGGTGACGC CCCTCTACAA CCTCCCCGGC
ATCATTCACG CCGCTGAGGT GGTGCTGGTC GAAGGGGAAA AGAGCGCCCA GGCGCTCATC
GATGCGGGAA TCCCGGCCAC CACCTCCATG GGCTCCAAGG GACAGATCAA CCGTGCCGAT
TGGAGTGTTC TCCAGGGAAA GCGGGTAATC ATCTGGCCCG ACCGGGACAA GGCAGGATGG
GAGTACGCCC AATTGGCTTC ACAGGCCGCC AGAAACGCGG GTGTTCGGGA AGTATCCATT
CTCACTCCAC CGGAGGAGAA ACCTGAAAAA TGGGATGCCG CTGATGCCAT GGCTGAAGGG
ATGGATGTGC GTGCTTTCAT CCATGGAACA CCACGTCAGG AACCACAGAC CCGGAAACGC
CGCATCCGAC TGATGGATTG GACCTTCGAC CGTTATGACG GCCCACCCCC GCCACGGGAG
TGGTTGGTTG AGGGTGTTCT TCCCCTCGGA GTGCCCGGCA TGGTCGCCGC CATCGGTGGA
GCAGGAAAAA GCATGCTGTT GTTGGACCTT TGCATCAAGG TGGCTCAGAT ACATACAGGG
AATCCCATTC CCACAGAGGC GCTGGGAGGT CCTTTGGTCC CTATTGAAGG TACAGCGGTC
ATGCTCACCG CTGAGGACGA TCAAGATGAG ATCCACAGAC GACTCAATCT GCTTGTTGGA
GATCTTCCAG ATCCCAGAAG GCTGATTGTG ATTCCACTGC CCAATGCAGG TGGTGCTATG
CCCCTTGTCG CCATGGGTCG TGAAGGCCCT GTACTCACTG ATGCCTACGA GGAGATGCGT
CAGGAGCTAT TGGAAATCCC AGACCTGCGA TTAGTGGTCA TCGATCCACT CCAAAGCTTT
GCAGGTGGAG ATGTCAATAG TGACCCCGCC GCAGGGTCCA TGTTCTTTGC TGGGTTGGGC
CGCATTGCTG CTGAAACAGG GGCAACCACA TTAGTAGCGC ACCATTTCAA GAAAGTGGGT
AGCAAACCCA TTCACAGCGC CAGTGAAGCC AGAGAAGCCA TCCGTGGCAC CACTGCCCTA
GTTGACGGTG GGCGCTGGTC TTACGCCCTA TGGGAAGCCT CACAGGATGA ATCCATCAAA
ATCTGTACCC AACTGCAACG CAGTTATGAA CGTGACTCTG TGTTCAATGG TGCGGTGGTC
AAAAGCAACT GGCCAGTTGA TAAAGCAGTT AGGGTCTATG TTCGCGAGTC ATCGACAGGG
TTACTACAAG ATCGTTCAGT TGACCTCGCT ATGCGCATCA GTGGCAATGA AGATTTAAGT
AAAAGTCTTG TCATGGCTCT GGGTAAAGCA GCATCCAATG GCCAACCATT CACGAAAACT
GGCGGTAATG GTGTCTTTGA ACGTAGATCA GAGCTTCCAG GCGACTTACA GGCGTTTTCC
AAGCATAAGA TAGCAGAGTT GATTGACTCC TTATTGCGAA CAGGACGGCT AGTGCAGTGC
GTAGCACCGG GTAGTCATAT CAAAAAATGG CTCGATGTTC CGGGGGGTGA GTTTGCACTT
GGCGTCGGTG AATTTCAGCT GGGATCTGGA GCTGAATGA
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| Protein sequence | MNNGAPYLDF NDAGGQQEFS SVAEQHHEKE EIKARLQSQI ESVLYHLLPA GKVRHGQFFI
GDVEGNPGES MKVELTGEKA GVWYDHAAGS GGDILDLWAR SRGMDTRTQF RDVMDDVRGW
LGESVRLPPV SMQPTQRREP PMDELGPHTG KWDYFDTNGQ LLVCVYRYDP PGRRKQFRPL
DVRTGKWQSP AVTPLYNLPG IIHAAEVVLV EGEKSAQALI DAGIPATTSM GSKGQINRAD
WSVLQGKRVI IWPDRDKAGW EYAQLASQAA RNAGVREVSI LTPPEEKPEK WDAADAMAEG
MDVRAFIHGT PRQEPQTRKR RIRLMDWTFD RYDGPPPPRE WLVEGVLPLG VPGMVAAIGG
AGKSMLLLDL CIKVAQIHTG NPIPTEALGG PLVPIEGTAV MLTAEDDQDE IHRRLNLLVG
DLPDPRRLIV IPLPNAGGAM PLVAMGREGP VLTDAYEEMR QELLEIPDLR LVVIDPLQSF
AGGDVNSDPA AGSMFFAGLG RIAAETGATT LVAHHFKKVG SKPIHSASEA REAIRGTTAL
VDGGRWSYAL WEASQDESIK ICTQLQRSYE RDSVFNGAVV KSNWPVDKAV RVYVRESSTG
LLQDRSVDLA MRISGNEDLS KSLVMALGKA ASNGQPFTKT GGNGVFERRS ELPGDLQAFS
KHKIAELIDS LLRTGRLVQC VAPGSHIKKW LDVPGGEFAL GVGEFQLGSG AE
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