Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1222 |
Symbol | |
ID | 4480829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1523324 |
End bp | 1524058 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639721965 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_865139 |
Protein GI | 117924522 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0114069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0644035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTTTC GTCAACTGTT TGAACCTCTT TCGAGTACGT ATACCTATAT TCTTGGCTGT GAAGAAAGTG GCAAGGCGTT GCTGATCGAT GGGGTAATGC CCACATGGCA GCGCGACCTT GGCGTCATCA AGCAGTTGGG GCTGAAGTTG ACCCACACTC TGGATACCCA CATCCATGCT GATCACATCA CTTCGGCAAG AACGCTGAAG CAGGAAGTCG GAAGTCGGAT TGCTCATCCA CGGATTGATG GATTGAATTG CACGGATGAC CCGTTGGAGG AAGGGACTGC ATTGGCAGTT GGGTCAATAA AATTGCATCC GCTTTTCACG CCAGGACATA CAGAAGGTCA TCACGCCTAT CATGTGAACG ACCGTGTTTT TACCGGTGAT GCTTTGCTCA TAGATGGTTG CGGGCGAACC GATTTTCAAG GAGGAGATGC GGCGCTGCTA TATCGCTCTA TCCACAAAAA GCTGTTCAGC TTGCCTGATG AAACACTGGT TTACCCAGGG CATGATTACA ACGGCCGATG GTGTTCTTGT GTTGGCCAGG AAAAAGCCAG GAACCCACGG CTTGGGAACG GCAAGTCAGA ATCTGATTTT ATCAAAATCA TGAATGAGTT GAACCTTCCC TATCCAAAAT TTATTGATTT TGCAGTCCCT GGAAACCAAG CCTGTGGGGT ATGCCCCGAA TCACTTCCAG AAGAGCTCAA AGCATACTGT CAGCCGATGA AATAG
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Protein sequence | MVFRQLFEPL SSTYTYILGC EESGKALLID GVMPTWQRDL GVIKQLGLKL THTLDTHIHA DHITSARTLK QEVGSRIAHP RIDGLNCTDD PLEEGTALAV GSIKLHPLFT PGHTEGHHAY HVNDRVFTGD ALLIDGCGRT DFQGGDAALL YRSIHKKLFS LPDETLVYPG HDYNGRWCSC VGQEKARNPR LGNGKSESDF IKIMNELNLP YPKFIDFAVP GNQACGVCPE SLPEELKAYC QPMK
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