Gene Mmc1_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1196 
Symbol 
ID4480512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1491905 
End bp1493110 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content54% 
IMG OID639721939 
Producthypothetical protein 
Protein accessionYP_865113 
Protein GI117924496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000270508 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000095719 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTACAGC TAAAAACGAA AACTCTGCTT GGTCTTGCTG CCTTGGCGGG TGGCTTTTCT 
GTGTCGCTGG CTGCGGCCCA ACCCATGCCC AGCGCGGAAC AGATGTGGGC GATTATTCAA
CAGCAACAAC AACAGATTCA GGCCCTGCAA CAGCAGTTGG GACAAACCAA CCAGCAGGTT
GCCCAAGTAG AAAAGGTGGC TGAAGAGGTT AAATCTAGCC GAGGTGCTGG TTCCCACTGG
TCCGATAAAG TGACCGTAAG TGGTTTGATT GAGGGTACGG TCTCCTCAAC CCAAAATAAG
GCAGGCAATA TGGCGGCCTT GGCCAACGGT AGCGACATCA ATTTGAAAAA GGCGGAGCTT
TCCATTGATG GGCAGGTCAA CCCCTGGGTG TCGGCCAATG TGACGCTGCT GTATGAAAAT
GATACCAACC CGCTCAATGT GGATGCCGCG ACCATTACGG TGGGCAATCG TGAAAAATTT
CCGGTCAGTG TGACCGTGGG GGCAATGGCA CTGCCCTTTG GGGTGTTTGA GTCCAATATG
GTCAGCGATC CCATCACCAA AGAGATGGCG GAGATTAAAG ATAGCGCGGT GGTGGTGAGC
TATGCTTTGA AAGGGTTTAC CGCCGATGTT TACGCCTTTA ACGGGGGTTC GCAAAAAACT
GGTAAAAACA ATAGCATTGA CCAGTTTGGT GGGGATATTG GTTACGAGGG CGAGTTTGAG
GGTGTAACCG CTGCTGTGGC TTTGCGCTAC GTCAACAGTG TCGAGAACGC CACCGGCCTG
TACGACGATC TAAGCACCCC AACCGATATG GCTGGTTACA CCTCGGCCTG GGGGGCTAAT
GGTAAGCTTA GCATGGGTGG TTTGACCTTG ATCGGTGAAT ATATTGGCCT GACCGACCAT
ATTCAGCAGA CCACCGCTGG CGACCGCAAC GGCGGTAAAA AAGCTTCGGC TTGGCAAACC
GAACTGGCCT ACAGCTTTCC CGCTTTGGGG CAAGAGGCCA TGGTGGCGGT GGCCTACAAC
GGCTCCGATG GTGCCCAGGT GGTGGATATG ATGCGTAGCC GCTACATGGC GCTGGCCGGG
ATTAGCGTCT ATGAAAATGC CAATCTTAAT CTTGAGTGGA AACGCGATGT GGATTATAGC
GTCGCCGATG GCGGTAGCGG CAACGATGCG GACTCCCTGA CCTTGCGCTT GGCGGTGACG
TTCTAA
 
Protein sequence
MLQLKTKTLL GLAALAGGFS VSLAAAQPMP SAEQMWAIIQ QQQQQIQALQ QQLGQTNQQV 
AQVEKVAEEV KSSRGAGSHW SDKVTVSGLI EGTVSSTQNK AGNMAALANG SDINLKKAEL
SIDGQVNPWV SANVTLLYEN DTNPLNVDAA TITVGNREKF PVSVTVGAMA LPFGVFESNM
VSDPITKEMA EIKDSAVVVS YALKGFTADV YAFNGGSQKT GKNNSIDQFG GDIGYEGEFE
GVTAAVALRY VNSVENATGL YDDLSTPTDM AGYTSAWGAN GKLSMGGLTL IGEYIGLTDH
IQQTTAGDRN GGKKASAWQT ELAYSFPALG QEAMVAVAYN GSDGAQVVDM MRSRYMALAG
ISVYENANLN LEWKRDVDYS VADGGSGNDA DSLTLRLAVT F