Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1108 |
Symbol | |
ID | 4482245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1388343 |
End bp | 1389362 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639721856 |
Product | putative transposase |
Protein accession | YP_865031 |
Protein GI | 117924414 |
COG category | [S] Function unknown |
COG ID | [COG5464] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGGCGATC ACGATAGCAG CTACAAGCAG CTCTTCAGCC ACGCAGAGAT GGTGCGTGAT CTGCTGTTGG GGTTTGTCCA GGAGGCGTGG GTCGAGCATC TCGATTTTAC CAGCCTTGAG AAGGTGAGTG GCAGCTATAT TACCGATGAC CTGCGGGATC GTGAGGATGA TGTCATCTGG CGGGTGCGCT GGGGCGAAGC GTGGCTCTAC ATTTTTGTGC TGATTGAGTT CCAATCGACG GTGGACTGGA TGATGGCGGT CCGCATGAAC GCCTACGTGA TGCTATTGTA TCAGGATTTG GTAAAATCCG GACAGGTGAA GCAGGGCGAG ATGTTGCCCC CGGTGCTGCC CATGGTGCTT TACAATGGGA AGCCAATCTG GTCAGCGGCG ACAGATGTGG CCGATCTTAT TCGCCCGGTT CCTGGAGGGC TTGAGCGTTT TCGCCCGCAT ATGCGTTATC TGCTGATAGA TGAAGTTCGC TATGAGGATG CGAAGCTGTT GGAGATGCAG AATCTGGCGG CGGCCTTATT CCGATTGGAG AAGAGCCAGT CACCAACGGA TATCCGCGCT GTTTTGAGTA GTCTGATCGA TTGGTTGAAA GCACCCGGTC AGTTGAGTTT GAGGCGAGCC TTCACCGTCA TGCTGGGCAG GGTGTTGTTG CCCAGGAAAG CGTTAGGTCA GGTGATCCCG GAGTTAAACG ATTTGCAGGA GGTAGATGCC ATGCTTGCCG AGACCGTGCT GGAGTGGACC AAAGAGTGGG AAGCCCAGGG TATACAGAAA GGGCTTCAGA AAGGGCTTCA GAAAGGGCTT CAGAAAGGGC TTCAGAAAGG GCTTCAGAAA GGGCTTCAGA AAGGGCGTCA AGAGGGGGAG TCTTCACTTC TTTTGCGTTT GCTTCATCGT CGTTTTGGAG ACATGCCTTC ATGGGCTGAG TCAAAAGTAG CGAATGCGAC CATTGACGAA CTTGATACCT GGGGCGAGCA AATTTTTGAT GCGGAGACGT TGGAAGACGT TTTCAAGTAG
|
Protein sequence | MGDHDSSYKQ LFSHAEMVRD LLLGFVQEAW VEHLDFTSLE KVSGSYITDD LRDREDDVIW RVRWGEAWLY IFVLIEFQST VDWMMAVRMN AYVMLLYQDL VKSGQVKQGE MLPPVLPMVL YNGKPIWSAA TDVADLIRPV PGGLERFRPH MRYLLIDEVR YEDAKLLEMQ NLAAALFRLE KSQSPTDIRA VLSSLIDWLK APGQLSLRRA FTVMLGRVLL PRKALGQVIP ELNDLQEVDA MLAETVLEWT KEWEAQGIQK GLQKGLQKGL QKGLQKGLQK GLQKGRQEGE SSLLLRLLHR RFGDMPSWAE SKVANATIDE LDTWGEQIFD AETLEDVFK
|
| |