Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1083 |
Symbol | |
ID | 4482098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1325819 |
End bp | 1328308 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639721832 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_865007 |
Protein GI | 117924390 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.220902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAGCC CCCCCGATCT GCCCATTGTG GCCACTTTGC AACCGCTGCA AGCGGCCTTG CTGCGCCATC CCAATGTTAT CCTTAGCGCC CCGCCGGGCT CCGGCAAAAC CACGGTGGTG CCCTTGGCTC TGTTGGATGC CCCCTGGTTG GCCGGAGAGC GCATCCTTAT GTTGGAACCT CGACGACTGG CGGCGCGGGC CGCTGCCAGC CGCATGGCCG AGCTGTTGCA GGAGCCGGTG GGGGAGCGGG TGGGCTATCA GATTCGCTTT GAGCGCAAGG TGGGGCCAAA CACCCGCGTC GAGGTGGTGA CAGAGGGCAT GCTCACCCGC CGCCTACAGT CCGACCCCGC CTTGCAGGGG GTGGGGGCGA TTCTGTTTGA TGAGTTTCAC GAACGCTCCT TGCAGGGTGA TCTGGGGTTG GCGCTGGCGT TGGAGCTGCA ACAGCTGCGT GACGACCTGC GCCTCTTGGT GATGTCGGCC ACCCTGGAGA GCCAGCGCTT GGCCAAGCTG TTGGGGGATG CCCCCATTAT AGAAGGGCAT GGACGTAGTT ACCCGGTGCA GGTGCGCTAT GCCAGCCAAC CCTATGCCCA TGTGGTGGAG GGGGTGGTGC AGACCATTCG TCAGGCGTTG GCCCAGGAGC GGGGGGATCT GCTCGCCTTT TTGCCGGGGG CGGGGGAGAT CCGCCGGGTG GAGGCCGCTT TGCGGTCAGG CTTGCCCGAT GATGTGACCC TATTGCCGCT TTATGGCGAG TTGGGTATGC AGGCCCAAGA TCGTGCCGTG CGCCCCTGGT TGGAGGGAGG ACGGCGGGTG ATCTTGGCAA CGGATATTGC CGAGACCAGT CTGACCATTC CGGGCATTCG GGTGGTGGTG GATGGGGGGT TGTGTAAACG TCCGCGTTTT CATGCCAGCA GTGGTTTGAC CCGGTTAGAG CGGCTGCGCA TCTCCGATGC CTCGGCACAA CAGCGGGCCG GACGGGCAGG GCGGCTGGAG CCGGGGGTCT GTTACCGTAT TTGGCCAGAA TCGCAACAGC GCATGCTGCA ACCGGCGACC CCTGCGGAGA TACGTGAGGC CGATCTGGCT CCGCTGCTGC TGGAGTTGGC CCTATGGGGG GTGGCAGATC CGACGCAAAT GAGCTGGCTG GACCCCCCGC CGGAAGGGGC GGTAGCGCAG GGTTGGGCGC TGTTGGTGGC GCTGGGCGCG GTGGATGAAG CACGGCATAT CACCCCCTTA GGGCGACAGA TGGCCCAACT GCCGTTGCAT CCGCGTTTGG CCCATATGGT GTGTATGGCC CCAGAGCCCG CAGCCCAGGC CATGGCCTGT GATGTGGCGG CGCTGCTCAG TGAACGAGAT CCTCTGAAAG GAGGGGCGCG CCAGGTGGAT CTGCACCTGC GTTGGCAAAG TGTGGCGCAG TTTCGGCGTC AGGGGAGCGC TGGGCCGGGG GTGGATGCGG CCAGCCTACA GCGGATTGTG CGGGGGGCGG ACCAGCTACG CCATCTATTG GGGGTGAGCC GTCAGCAGGT GGCCCATGGT GATCTGGGGC TGCTGTTGGC GGCGGCCTAC CCCGACCGGG TGGCGCAGTT GCGGCCAGGG CAGCGGGGGC GCTATCTGCT GGCGAGCGGG CGTGGGGTGC GGTTGGATGA GATGGACCCC TTGAGTGGTG AGCCGCTGCT GGTGGTGGCC GCGCTGGATG CCGGTGAAGC GGAGGGACGG GCCTATTTGG CGGTCTCTTT GGCGCAAGAG GCCTTCATGG CGCTTCAGCC GCCGGCGTGG CAGGCGCAGG TGGTGTGGTC TGACCAGCAG CAGCGGGTGG TGGCAGAGCG CCAGCGCTGT TTTGGCGCGT TGGTACTGGA GCGGCAACCC CTGCATGGCG AGGCCCCCGA GGCTGCGGTG TTGGCGGCCA TGTTGGTGGG GGTGCGGCGC ATGGGGCTGG CGGTGTTGCC CTGGACGCCA GCGGCCATGC AGTATCAAGC CAGGGTGCAG TTGATGGCGC GTCTTGAGTC GGGCTGGCCG TTGTTGGAAG AGGCTGTGCT GCTGGAACAG TTGGAGCAGT GGTTGGCCCC TTTTCTACGT GGGGTGAATC GGCGGGCACA GTTGGAGCGC CTGAATATGT TGGAGATTTT GCAAAGTCAA TTAACGTGGT CCCAGCAGCA GAGCTTGGAA CAGGCGCTAC CGACGCACTA TGAGGTGCCC AGCGGTTCCC GCATTAAATT GGATTATACG GCAGGGGCGC AGCCGGTATT GGCGGTGCGC ATTCAAGAGC TGTTTGGTTT GGCCGAGAGC CCGTGTCTTG GCCAGGGGCG GGTGCCGGTT ACGTTGCATC TGCTCAATCC TGCCCAGCGT CCGGTGCAAG TGACCAGCGA TCTGCGCGGA TTTTGGCAGA CCACCTGGCC CCAGGTGCGC AAGGAGCTAC GTGGACGCTA TCCCAAACAT CACTGGCCAG AAAACCCCTG GCAGGCCCAA GCCACCGCCC GCGCCAAACC CCGGAGTTAA
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Protein sequence | MFSPPDLPIV ATLQPLQAAL LRHPNVILSA PPGSGKTTVV PLALLDAPWL AGERILMLEP RRLAARAAAS RMAELLQEPV GERVGYQIRF ERKVGPNTRV EVVTEGMLTR RLQSDPALQG VGAILFDEFH ERSLQGDLGL ALALELQQLR DDLRLLVMSA TLESQRLAKL LGDAPIIEGH GRSYPVQVRY ASQPYAHVVE GVVQTIRQAL AQERGDLLAF LPGAGEIRRV EAALRSGLPD DVTLLPLYGE LGMQAQDRAV RPWLEGGRRV ILATDIAETS LTIPGIRVVV DGGLCKRPRF HASSGLTRLE RLRISDASAQ QRAGRAGRLE PGVCYRIWPE SQQRMLQPAT PAEIREADLA PLLLELALWG VADPTQMSWL DPPPEGAVAQ GWALLVALGA VDEARHITPL GRQMAQLPLH PRLAHMVCMA PEPAAQAMAC DVAALLSERD PLKGGARQVD LHLRWQSVAQ FRRQGSAGPG VDAASLQRIV RGADQLRHLL GVSRQQVAHG DLGLLLAAAY PDRVAQLRPG QRGRYLLASG RGVRLDEMDP LSGEPLLVVA ALDAGEAEGR AYLAVSLAQE AFMALQPPAW QAQVVWSDQQ QRVVAERQRC FGALVLERQP LHGEAPEAAV LAAMLVGVRR MGLAVLPWTP AAMQYQARVQ LMARLESGWP LLEEAVLLEQ LEQWLAPFLR GVNRRAQLER LNMLEILQSQ LTWSQQQSLE QALPTHYEVP SGSRIKLDYT AGAQPVLAVR IQELFGLAES PCLGQGRVPV TLHLLNPAQR PVQVTSDLRG FWQTTWPQVR KELRGRYPKH HWPENPWQAQ ATARAKPRS
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